The involvement of collagens in connective tissue diseases, together with the health related implications of the macrophage scavenger receptor, C1q and other triple-helix containing proteins makes it important to elucidate the properties of the triple-helix. This laboratory has used triple-helical peptides of defined sequence to approach the effect of amino acid sequence on conformation, and our peptides have provided a basis for collaborative studies leading to the first high resolution structure of a triple-helix by x-ray crystallography and the first 2-D NMR studies of triplehelica1 molecules. To understand the propensities of different residues to adopt a triple-helical conformation, a set of host-guest peptides will be synthesized where a single """"""""guest"""""""" Gly-X-Y tripeptide unit is introduced into a defined environment of Gly-Pro-Hyp units. The relative stabilities of the most common Gly-X-Y triplets will be applied to detect variations along collagen sequences and will be used, together with molecular modeling, to define interactions stabilizing the triple-helix. The electrostatic interactions of a peptide with a single Gly-Glu-Lys unit have been characterized, and crystals obtained of this peptide will allow a molecular definition of these interactions. Analyses of the frequencies and clustering of tripeptide units will be done on triple-helices of collagens and non-collagenous proteins to clarify features common to all triple-helices and features related to specific higher level interactions. Triple-helical domains interact with a wide variety of ligands, yet there is little information on the molecular interactions which form the basis of specific recognition of sites along the rather uniform triple-helix. To explore the basis of recognition, studies will be carried out on overlapping peptides containing sequences surrounding a collagen epitope to a monoclonal antibody. Experiments are designed to -test the hypothesis that recognition is achieved by the determinant sequence when it is surrounded by flexible triplets containing Gly-Gly sequences. A peptide containing sequences of the triple-helical ligand binding region of the macrophage scavenger receptor will also be studied to determine the basis for its broad yet discriminating polyanionic ligand specificity. Glycine substitutions in type I collagen triple-helices have been found in many cases of osteogenesis imperfecta (""""""""brittle bone"""""""" disease), but it is not clear how the variable clinical phenotypes, ranging from mild to lethal, relate to the location of the substitution along the-chain. A single Gly- greater than Ser mutation at residue 901 results in a mild OI case, yet a Gly- greater than Ser at residue 913 results in a lethal OI case. Peptides will be synthesized to clarify whether different local environments of these mutations are the cause of variations seen in collagen stability and clinical phenotype. These studies will make a contribution to understanding the basic interactions required for protein stability as well as developing a structural basis for consideration of the triple-helix, and antibodies to triple-helical domains, in pathological states.

Agency
National Institute of Health (NIH)
Institute
National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Type
Research Project (R01)
Project #
2R01AR019626-17
Application #
2078436
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Project Start
1977-03-01
Project End
1999-08-31
Budget Start
1995-09-30
Budget End
1996-08-31
Support Year
17
Fiscal Year
1995
Total Cost
Indirect Cost
Name
University of Medicine & Dentistry of NJ
Department
Biochemistry
Type
Schools of Medicine
DUNS #
622146454
City
Piscataway
State
NJ
Country
United States
Zip Code
08854
Kramer, R Z; Bella, J; Brodsky, B et al. (2001) The crystal and molecular structure of a collagen-like peptide with a biologically relevant sequence. J Mol Biol 311:131-47
Kramer, R Z; Venugopal, M G; Bella, J et al. (2000) Staggered molecular packing in crystals of a collagen-like peptide with a single charged pair. J Mol Biol 301:1191-205
Ackerman, M S; Bhate, M; Shenoy, N et al. (1999) Sequence dependence of the folding of collagen-like peptides. Single amino acids affect the rate of triple-helix nucleation. J Biol Chem 274:7668-73
Shah, N K; Brodsky, B; Kirkpatrick, A et al. (1999) Structural consequences of D-amino acids in collagen triple-helical peptides. Biopolymers 49:297-302
Baum, J; Brodsky, B (1999) Folding of peptide models of collagen and misfolding in disease. Curr Opin Struct Biol 9:122-8
Ramshaw, J A; Shah, N K; Brodsky, B (1998) Gly-X-Y tripeptide frequencies in collagen: a context for host-guest triple-helical peptides. J Struct Biol 122:86-91
Beck, K; Brodsky, B (1998) Supercoiled protein motifs: the collagen triple-helix and the alpha-helical coiled coil. J Struct Biol 122:17-29
Kramer, R Z; Vitagliano, L; Bella, J et al. (1998) X-ray crystallographic determination of a collagen-like peptide with the repeating sequence (Pro-Pro-Gly). J Mol Biol 280:623-38
Liu, X; Kim, S; Dai, Q H et al. (1998) Nuclear magnetic resonance shows asymmetric loss of triple helix in peptides modeling a collagen mutation in brittle bone disease. Biochemistry 37:15528-33
Yang, W; Battineni, M L; Brodsky, B (1997) Amino acid sequence environment modulates the disruption by osteogenesis imperfecta glycine substitutions in collagen-like peptides. Biochemistry 36:6930-5

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