We shall measure the mechanics of permeabilized muscle fibers in the presence of ATP analogs and other ligands which bind to the myosin nucleotide site. The alterations in the mechanical properties of muscle fibers under these conditions will be correlated with solution biochemistry of the actomyosin system. The mechanical data will also be combined with structural data obtained with EPR probes for fibers activated under the same conditions. Together these three sets of data will be used to define models of cross-bridge function in order to better understand the production of force and motion in actively contracting muscle. The mechanics of active fibers will be characterized by three measurements. Fiber stiffness will be measured for different rates of stretch to assess the rates of attachment into bound states. Photolytically released caged phosphate and the rate of tension increase following rapid shortening will both probe the transition of cross-bridges from low-force, weakly-attached states into high-force, strongly-attached powerstroke states. Structural data on these fibers will be obtained from paramagnetic probes placed at three sites. Probes on the light chains will monitor the orientation of the neck region of the myosin head, while probes at a reactive cysteine will measure that of the catalytic domain. In addition we will develop a novel set of probes placed specifically at the nucleotide site by employing some of the above photoaffinity analogs to determine what changes occur in the conformation of the nucleotide pocket, and how these changes are correlated with the mechanical state of the fiber. In a related project we will employ a temperature jump technique to investigate the mechanics of fibers activated in high (15-39 degree C) temperatures. Recent results show that at temperatures above 20 degree C several mechanical parameters behave differently than at low temperatures. In particular, a decrease in pH, thought to play a major role in fatigued muscle, has a greatly reduced effect at the higher temperatures. Together the results obtained in the above experiments will help define the kinetics and energetics of a number of states in the cross-bridge cycle, allowing us to make more realistic models of this interaction, leading to a better understanding of the complex phenomena of active muscle and to a deeper understanding of muscle fatigue.

Agency
National Institute of Health (NIH)
Institute
National Institute of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
Type
Research Project (R01)
Project #
5R01AR039643-07
Application #
2079638
Study Section
Physiology Study Section (PHY)
Project Start
1989-08-16
Project End
1998-07-31
Budget Start
1995-08-01
Budget End
1996-07-31
Support Year
7
Fiscal Year
1995
Total Cost
Indirect Cost
Name
Washington State University
Department
Biostatistics & Other Math Sci
Type
Schools of Arts and Sciences
DUNS #
041485301
City
Pullman
State
WA
Country
United States
Zip Code
99164
Naber, Nariman; Purcell, Thomas J; Pate, Edward et al. (2007) Dynamics of the nucleotide pocket of myosin measured by spin-labeled nucleotides. Biophys J 92:172-84
Minehardt, T J; Kollman, P A; Cooke, R et al. (2006) The open nucleotide pocket of the profilin/actin x-ray structure is unstable and closes in the absence of profilin. Biophys J 90:2445-9
Lawson, J David; Pate, Edward; Rayment, Ivan et al. (2004) Molecular dynamics analysis of structural factors influencing back door pi release in myosin. Biophys J 86:3794-803
Naber, Nariman; Minehardt, Todd J; Rice, Sarah et al. (2003) Closing of the nucleotide pocket of kinesin-family motors upon binding to microtubules. Science 300:798-801
Minehardt, Todd J; Marzari, Nicola; Cooke, Roger et al. (2002) A classical and ab initio study of the interaction of the myosin triphosphate binding domain with ATP. Biophys J 82:660-75
Chen, Xiaoru; Grammer, Jean; Lawson, J David et al. (2002) A novel restricted photoaffinity spin-labeled non-nucleoside ATP analogue as a covalently attached reporter group of the active site of Myosin subfragment 1. Biochemistry 41:2609-20
Minehardt, T J; Cooke, R; Pate, E et al. (2001) Molecular dynamics study of the energetic, mechanistic, and structural implications of a closed phosphate tube in ncd. Biophys J 80:1151-68
Chen, X; Grammer, J; Cooke, R et al. (2000) Synthesis and characterization of novel spin-labeled photoaffinity nonnucleoside analogues of ATP as structural and EPR probes for myosin. Bioconjug Chem 11:725-33
Wang, D; Luo, Y; Cooke, R et al. (1999) Synthesis of a spin-labeled photoaffinity ATP analogue, and its use to specifically photolabel myosin cross-bridges in skeletal muscle fibers. J Muscle Res Cell Motil 20:743-53
Pate, E; Franks-Skiba, K; Cooke, R (1998) Depletion of phosphate in active muscle fibers probes actomyosin states within the powerstroke. Biophys J 74:369-80

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