Ionizing radiation causes mutation, transformation, and lethal effects in living systems. DMA damage is intimately involved in these effects. The long term goals of this work are to clarify the radiation chemical mechanisms by which DNA damage is produced by ionizing radiation in the cellular environment, and by which it may be modified and repaired. This will permit an evaluation of the ability of cellular systems to cope with this damage, and also provide the means to design improved methods of influencing these processes, for example with radiosensitizers and radioprotectors The nature and spatial distribution of the DNA damage products is strongly influenced by the ionization mechanism, the clustering of the ionization events, and also by the presence of nearby chemical species such as amino acid residues in DNA binding proteins. These effects of these processes are understood in isolation but not in combination. Our approach uses adaptable model systems with which we can adjust the processes individually. We use oligo-arginines, the lac represser, and histones to examine the effects of DNA binding proteins. The DNA damage is detected as in general as strand breaks or base damages in plasmid targets, and also as the particular low molecular weight products 5-methylenefuanone and 8-oxo-7,8-dihydroguanine which can be identified chromatographically. Because the DNA damage is produced under controlled conditions, we can make a quantitative description of the processes in terms of rate constants and lifetimes of intermediates. The result will be an improved understanding of how DNA damage is produced under physiological conditions. With a renewed emphasis on nuclear power, debate over long term storage of radioactive waste, and terrorism related issues, there is a substantial concern about the hazards associated with ionizing radiation. Rational risk estimation requires an understanding of the mechanisms involved. Applications to human health include defining the causes of individual variation in radiosensitivity and the development of mechanistic models for risk estimation of cancer etiology by low dose and low dose rate exposures. ? ? ?

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
2R01CA046295-17
Application #
7315590
Study Section
Radiation Therapeutics and Biology Study Section (RTB)
Program Officer
Pelroy, Richard
Project Start
1988-12-15
Project End
2012-05-31
Budget Start
2007-07-27
Budget End
2008-05-31
Support Year
17
Fiscal Year
2007
Total Cost
$251,324
Indirect Cost
Name
University of California San Diego
Department
Radiation-Diagnostic/Oncology
Type
Schools of Medicine
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Lee, Melissa; Urata, Sarah M; Aguilera, Joe A et al. (2012) Modeling the influence of histone proteins on the sensitivity of DNA to ionizing radiation. Radiat Res 177:152-63
Konigsfeld, Katie M; Lee, Melissa; Urata, Sarah M et al. (2012) Free terminal amines in DNA-binding peptides alter the product distribution from guanine radicals produced by single electron oxidation. Int J Radiat Biol 88:230-8
Peoples, Anita R; Lee, Jane; Weinfeld, Michael et al. (2012) Yields of damage to C4' deoxyribose and to pyrimidines in pUC18 by the direct effect of ionizing radiation. Nucleic Acids Res 40:6060-9
Do, Trinh T; Tang, Vicky J; Konigsfeld, Katie et al. (2012) Damage clusters after gamma irradiation of a nanoparticulate plasmid DNA peptide condensate. Radiat Environ Biophys 51:43-52
Perry, Christopher C; Urata, Sarah M; Lee, Melissa et al. (2012) Radioprotective effects produced by the condensation of plasmid DNA with avidin and biotinylated gold nanoparticles. Radiat Environ Biophys 51:457-68
Tang, Vicky J; Konigsfeld, Katie M; Aguilera, Joe A et al. (2012) DNA Binding Hydroxyl Radical Probes. Radiat Phys Chem Oxf Engl 1993 81:46-51
Perry, Christopher C; Tang, Vicky J; Konigsfeld, Katie M et al. (2011) Use of a coumarin-labeled hexa-arginine peptide as a fluorescent hydroxyl radical probe in a nanoparticulate plasmid DNA condensate. J Phys Chem B 115:9889-97
Perry, Christopher C; Sabir, Theodore S; Livingston, Wesley J et al. (2011) Fluorescence of commercial Pluronic F127 samples: Temperature-dependent micellization. J Colloid Interface Sci 354:662-9
Do, Trinh T; Tang, Vicky J; Aguilera, Joe A et al. (2011) Characterization of a lipophilic plasmid DNA condensate formed with a cationic peptide fatty acid conjugate. Biomacromolecules 12:1731-7
Tsoi, Mandi; Do, Trinh T; Tang, Vicky J et al. (2010) Reduction of electron deficient guanine radical species in plasmid DNA by tyrosine derivatives. Org Biomol Chem 8:2553-9

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