This proposal builds upon the database, specimen repository, and preliminary findings from our ongoing Ecogenetic Study of Lung Cancer in Minority Populations (RO1 CA55769). This case-control study in African- American and Mexican-American men and women integrates epidemiologic data with cytogenetic and molecular markers of susceptibility, and is based on the theme of interindividual and ethnic differences in susceptibility to tobacco carcinogenesis. We will extend the study (from a projected 150 African-American cases and controls and 75 Mexican-American cases and 150 controls) to accrue 400 additional lung cancer cases of all ethnicities and 400 sex-, age- and ethnicity-matched controls prospectively identified. Using the same study protocol, personnel, and data collection instruments will ensure comparability of the data across both phases of the study.
Our Specific Aims are: 1. To assess tobacco mutagen sensitivity by quantitating the chromatid breaks induced by in-vitro exposure to bleomycin and benzo-[a]-pyrene- diol-epoxide. 2. To evaluate DNA repair capacity after BPDE exposure as a risk factor for lung cancer using the host cell reactivation (HCR) DNA repair assay in the newly accrued cases and controls, to compare with the mutagen sensitivity outlined in Specific Aim 1. 3. To test the hypothesis that the in-vitro induced chromatid breaks are not randomly distributed, but affect specific chromosome loci, using cytogenetic (Q-banding) and molecular chromosome painting) techniques on tumor and normal tissue. 4. To estimate ethnic-specific genotype frequencies of cytochrome P450 CYP2D6 and CYP1A1 and glutathione-S-transferase (GST) mu and theta (funded by E50671 7, PI-Dr. J. Wiencke). 5. To correlate levels of smoking-related DNA adducts in DNA isolated from the lymphocytes of a subsample of cases and controls by 32P post-labeling techniques with smoking status, mutagen sensitivity, DNA repair capacity and metabolic polymorphisms.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
5R01CA055769-08
Application #
2733030
Study Section
Special Emphasis Panel (ZRG4-NTN (01))
Program Officer
Iwamoto, Kumiko
Project Start
1991-09-30
Project End
1999-06-30
Budget Start
1998-07-01
Budget End
1999-06-30
Support Year
8
Fiscal Year
1998
Total Cost
Indirect Cost
Name
University of Texas MD Anderson Cancer Center
Department
Public Health & Prev Medicine
Type
Other Domestic Higher Education
DUNS #
001910777
City
Houston
State
TX
Country
United States
Zip Code
77030
Feng, Yun; Wang, Yanru; Liu, Hongliang et al. (2018) Novel genetic variants in the P38MAPK pathway gene ZAK and susceptibility to lung cancer. Mol Carcinog 57:216-224
Liu, Hongliang; Liu, Zhensheng; Wang, Yanru et al. (2017) Functional variants in DCAF4 associated with lung cancer risk in European populations. Carcinogenesis 38:541-551
Feng, Yun; Wang, Yanru; Liu, Hongliang et al. (2017) Genetic variants of PTPN2 are associated with lung cancer risk: a re-analysis of eight GWASs in the TRICL-ILCCO consortium. Sci Rep 7:825
Pan, Yongchu; Liu, Hongliang; Wang, Yanru et al. (2017) Associations between genetic variants in mRNA splicing-related genes and risk of lung cancer: a pathway-based analysis from published GWASs. Sci Rep 7:44634
Yin, Jieyun; Liu, Hongliang; Liu, Zhensheng et al. (2017) Pathway-analysis of published genome-wide association studies of lung cancer: A potential role for the CYP4F3 locus. Mol Carcinog 56:1663-1672
Zhou, Fei; Wang, Yanru; Liu, Hongliang et al. (2017) Susceptibility loci of CNOT6 in the general mRNA degradation pathway and lung cancer risk-A re-analysis of eight GWASs. Mol Carcinog 56:1227-1238
Yuan, Hua; Liu, Hongliang; Liu, Zhensheng et al. (2016) A Novel Genetic Variant in Long Non-coding RNA Gene NEXN-AS1 is Associated with Risk of Lung Cancer. Sci Rep 6:34234
David, Sean P; Wang, Ange; Kapphahn, Kristopher et al. (2016) Gene by Environment Investigation of Incident Lung Cancer Risk in African-Americans. EBioMedicine 4:153-61
Patel, Yesha M; Park, Sunghim L; Han, Younghun et al. (2016) Novel Association of Genetic Markers Affecting CYP2A6 Activity and Lung Cancer Risk. Cancer Res 76:5768-5776
Kang, Xiaozheng; Liu, Hongliang; Onaitis, Mark W et al. (2016) Polymorphisms of the centrosomal gene (FGFR1OP) and lung cancer risk: a meta-analysis of 14,463 cases and 44,188 controls. Carcinogenesis 37:280-289

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