Human pancreatic ribonuclease (RNase 1) is a secretory enzyme that can block the flow of biochemical information by catalyzing the cleavage of cellular RNA. Our intent is to use ideas and methods from biological chemistry, molecular biology, and cell biology to reveal key mechanistic aspects of the cytotoxicity of human RNase 1 in physiological and (potentially) clinical settings. During the next grant period, this intent will be achieved in four Specific Aims.
Specific Aims. In Aim 1, we will determine whether the complex of RNase 1 with the cytosolic ribonuclease inhibitor protein (which has femtomolar affinity for RNase 1) acts as a ?sensor? for oxidative damage within a human cell.
In Aim 2, we will determine the structural and physiological roles of the N-linked glycans that are installed on RNase 1.
In Aim 3, we will develop an RNase 1 zymogen as a ?prodrug? that is activated by matrix metalloproteases.
In Aim 4, we will evaluate RNase 1 as an endogenous antimicrobial agent. Significance. The results of the research proposed herein will provide a detailed biochemical understanding of the cytotoxic activity of RNase 1, and could ultimately lead to new chemotherapeutic agents based on an endogenous human enzyme.

Public Health Relevance

This research project is focused on enabling the development of a new class of chemotherapeutic agents based on a protein that is found naturally in the human body. Specifically, the agents are based on ribonuclease, which is an enzyme that can enter human cells and catalyze the cleavage of RNA, leading to cell death. The goal of the project is to obtain fundamental insights into the relationship between the amino-acid sequence of ribonuclease, its three-dimensional structure, and its biological function, and to use those insights to create novel ribonucleases of potential therapeutic utility.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
2R01CA073808-23
Application #
10052006
Study Section
Macromolecular Structure and Function A Study Section (MSFA)
Program Officer
Forry, Suzanne L
Project Start
1997-07-10
Project End
2025-06-30
Budget Start
2020-07-01
Budget End
2021-06-30
Support Year
23
Fiscal Year
2020
Total Cost
Indirect Cost
Name
Massachusetts Institute of Technology
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
001425594
City
Cambridge
State
MA
Country
United States
Zip Code
02142
Hoang, Trish T; Tanrikulu, I Caglar; Vatland, Quinn A et al. (2018) A Human Ribonuclease Variant and ERK-Pathway Inhibitors Exhibit Highly Synergistic Toxicity for Cancer Cells. Mol Cancer Ther 17:2622-2632
Thomas, Sydney P; Hoang, Trish T; Ressler, Valerie T et al. (2018) Human angiogenin is a potent cytotoxin in the absence of ribonuclease inhibitor. RNA 24:1018-1027
Chyan, Wen; Raines, Ronald T (2018) Enzyme-Activated Fluorogenic Probes for Live-Cell and in Vivo Imaging. ACS Chem Biol 13:1810-1823
Lomax, Jo E; Eller, Chelcie H; Raines, Ronald T (2017) Comparative functional analysis of ribonuclease 1 homologs: molecular insights into evolving vertebrate physiology. Biochem J 474:2219-2233
Chyan, Wen; Kilgore, Henry R; Gold, Brian et al. (2017) Electronic and Steric Optimization of Fluorogenic Probes for Biomolecular Imaging. J Org Chem 82:4297-4304
Hoang, Trish T; Raines, Ronald T (2017) Molecular basis for the autonomous promotion of cell proliferation by angiogenin. Nucleic Acids Res 45:818-831
Hoang, Trish T; Smith, Thomas P; Raines, Ronald T (2017) A Boronic Acid Conjugate of Angiogenin that Shows ROS-Responsive Neuroprotective Activity. Angew Chem Int Ed Engl 56:2619-2622
Andersen, Kristen A; Smith, Thomas P; Lomax, Jo E et al. (2016) Boronic Acid for the Traceless Delivery of Proteins into Cells. ACS Chem Biol 11:319-23
Arnold, Ulrich; Raines, Ronald T (2016) Replacing a single atom accelerates the folding of a protein and increases its thermostability. Org Biomol Chem 14:6780-5
Thomas, Sydney P; Kim, Eunji; Kim, Jin-Soo et al. (2016) Knockout of the Ribonuclease Inhibitor Gene Leaves Human Cells Vulnerable to Secretory Ribonucleases. Biochemistry 55:6359-6362

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