The proposed research is motivated by problems arising in the statistical design and analysis of cancer clinical trials. In each trial, outcome-adaptive decisions are made repeatedly as the trial progresses and the data from patients treated previously in the trial become available. Possible decisions include choosing a patient's dose or treatment, dropping a treatment, stopping the trial, adaptive randomization, and selecting an optimal treatment or multi-course treatment strategy. Because outcome-adaptive methods use more available information on a more timely basis, they are more scientifically valid and more ethical. At each interim analysis, the underlying model must be re-fit and decision criteria re-computed, which requires either updating the posterior under a Bayesian model, or computing a test statistic under a frequentist model. We evaluate average design behavior by computer simulation, which requires the interim decision criteria to be computed many times. Consequently, the proposed methods are computationally intensive. We also will apply more formal criteria, including Bayesian A-, D-, or T-optimality and decision theoretic methods. Depending on the application, the trial may involve various types of multiplicities, including multivariate outcomes, multiple disease subtypes, multiple treatments, or multiple courses of treatment per patient. We will explore and apply Bayesian regression models, hierarchical models, and latent variable models to accommodate these multiplicities and account for heterogeneity and association. Proposed research projects include developing models, methods and designs for (1) Dose-finding in clinical trials where the doses of two agents are varied, with the goal to find several acceptable dose pairs; (2) Dose finding in clinical trials where patient outcome is a multivariate ordinal variable representing several qualitatively different toxicities having different clinical importance; (3) Clinical trials in diseases with multiple subtypes; (4) Evaluating treatment effects on a disease presenting in multiple body sites in each patient; (5) Carrying out both dose-finding and treatment selection with multiple treatments; (6) Accounting for patient heterogeneity in Bayesian models when clinical outcome is multinomial; and (7) Frequentist selection and testing designs based on a bivariate outcome including response and toxicity. In order to promulgate the methods to the statistical and medical communities, user-friendly computer software for implementation will be made freely available.

Agency
National Institute of Health (NIH)
Institute
National Cancer Institute (NCI)
Type
Research Project (R01)
Project #
2R01CA083932-04
Application #
6613258
Study Section
Social Sciences, Nursing, Epidemiology and Methods 4 (SNEM)
Program Officer
Feuer, Eric J
Project Start
2000-04-03
Project End
2007-03-31
Budget Start
2003-05-16
Budget End
2004-03-31
Support Year
4
Fiscal Year
2003
Total Cost
$151,000
Indirect Cost
Name
University of Texas MD Anderson Cancer Center
Department
Biostatistics & Other Math Sci
Type
Other Domestic Higher Education
DUNS #
800772139
City
Houston
State
TX
Country
United States
Zip Code
77030
Murray, Thomas A; Yuan, Ying; Thall, Peter F et al. (2018) A utility-based design for randomized comparative trials with ordinal outcomes and prognostic subgroups. Biometrics 74:1095-1103
Chapple, Andrew G; Thall, Peter F (2018) A Hybrid Phase I-II/III Clinical Trial Design Allowing Dose Re-Optimization in Phase III. Biometrics :
Morita, Satoshi; Thall, Peter F; Takeda, Kentaro (2017) A simulation study of methods for selecting subgroup-specific doses in phase 1 trials. Pharm Stat 16:143-156
Thall, Peter F; Ursino, Moreno; Baudouin, Véronique et al. (2017) Bayesian treatment comparison using parametric mixture priors computed from elicited histograms. Stat Methods Med Res :962280217726803
Chapple, Andrew G; Vannucci, Marina; Thall, Peter F et al. (2017) Bayesian variable selection for a semi-competing risks model with three hazard functions. Comput Stat Data Anal 112:170-185
Thall, Peter F; Nguyen, Hoang Q; Zinner, Ralph G (2017) Parametric Dose Standardization for Optimizing Two-Agent Combinations in a Phase I-II Trial with Ordinal Outcomes. J R Stat Soc Ser C Appl Stat 66:201-224
Xu, Yanxun; Thall, Peter F; Müller, Peter et al. (2017) A Decision-Theoretic Comparison of Treatments to Resolve Air Leaks After Lung Surgery Based on Nonparametric Modeling. Bayesian Anal 12:639-652
Wathen, J Kyle; Thall, Peter F (2017) A simulation study of outcome adaptive randomization in multi-arm clinical trials. Clin Trials 14:432-440
Murray, Thomas A; Thall, Peter F; Yuan, Ying et al. (2017) Robust treatment comparison based on utilities of semi-competing risks in non-small-cell lung cancer. J Am Stat Assoc 112:11-23
Thall, Peter F; Mueller, Peter; Xu, Yanxun et al. (2017) Bayesian nonparametric statistics: A new toolkit for discovery in cancer research. Pharm Stat 16:414-423

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