The detoxification of ammonia in humans occurs primarily in the liver through the combined action of five enzymes. These enzymes catalyze the transformation of ammonia into urea for eventual disposition via the urine. The primary objective of this proposal is to elucidate the detailed mechanisms of action for argininosuccinate lyase and argininosuccinate synthetase. These enzymes catalyze the reactions that are currently thought to control the rate limiting steps in the metabolism of ammonia into urea. This research should have a significant impact in revealing the factors that control arginine and urea biosynthesis. This information is vital for the effective treatment of urea cycle diseases such as citrullinemia and argininosuccinate aciduria. Steady-state and rapid reaction kinetic studies along with magnetic resonance techniques will be the principle methods used in accomplishing these objectives. The primary aims of the proposed research are as follows. 1. Determine the identity of any intermediates involved in the reactions catalyzed by argininosuccinate synthetase and argininosuccinate lyase. 2. Quantitate all of the rate constants leading to the formation and breakdown of enzyme complexes occurring along the reaction pathways. 3. Identify the structural and functional roles of the divalent cations required in the argininosuccinate synthetase reaction. 4. Elucidate the amino acids at the active sites of these enzymes and determine the function of these groups in catalysis and/or binding of substrates and products.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK030343-05
Application #
3229400
Study Section
Biochemistry Study Section (BIO)
Project Start
1982-01-01
Project End
1987-12-31
Budget Start
1986-01-01
Budget End
1986-12-31
Support Year
5
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Texas A&M University
Department
Type
Schools of Arts and Sciences
DUNS #
City
College Station
State
TX
Country
United States
Zip Code
77845
Meyer, Megan E; Gutierrez, Jemy A; Raushel, Frank M et al. (2010) A conserved glutamate controls the commitment to acyl-adenylate formation in asparagine synthetase. Biochemistry 49:9391-401
Lund, Liliya; Fan, Yubo; Shao, Qiang et al. (2010) Carbamate transport in carbamoyl phosphate synthetase: a theoretical and experimental investigation. J Am Chem Soc 132:3870-8
Fan, Yubo; Lund, Liliya; Shao, Qiang et al. (2009) A combined theoretical and experimental study of the ammonia tunnel in carbamoyl phosphate synthetase. J Am Chem Soc 131:10211-9
Williams, Lakenya; Fresquet, Vicente; Santander, Patricio J et al. (2007) The multiple amidation reactions catalyzed by Cobyric acid synthetase from Salmonella typhimurium are sequential and dissociative. J Am Chem Soc 129:294-5
Thoden, James B; Huang, Xinyi; Kim, Jungwook et al. (2004) Long-range allosteric transitions in carbamoyl phosphate synthetase. Protein Sci 13:2398-405
Fresquet, Vicente; Thoden, James B; Holden, Hazel M et al. (2004) Kinetic mechanism of asparagine synthetase from Vibrio cholerae. Bioorg Chem 32:63-75
Kim, Jungwook; Raushel, Frank M (2004) Access to the carbamate tunnel of carbamoyl phosphate synthetase. Arch Biochem Biophys 425:33-41
Kim, Jungwook; Raushel, Frank M (2004) Perforation of the tunnel wall in carbamoyl phosphate synthetase derails the passage of ammonia between sequential active sites. Biochemistry 43:5334-40
Fresquet, Vicente; Williams, LaKenya; Raushel, Frank M (2004) Mechanism of cobyrinic acid a,c-diamide synthetase from Salmonella typhimurium LT2. Biochemistry 43:10619-27
Raushel, Frank M; Thoden, James B; Holden, Hazel M (2003) Enzymes with molecular tunnels. Acc Chem Res 36:539-48

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