The objective of this research is to provide a molecular understanding of an unusual alternative splicing of bovine growth hormone (bGH) pre-mRNA in which the last intron is retained in a small proportion of mature message to produce an intron-encoded variant bovine growth hormone (vbGH). An efficient in vitro splicing system will be used to test the hypothesis that constitutive splicing factors mediate a collaborative interaction between short, positive-acting signals in the downstream exon and a weak, upstream 5' splice site to produce the spliced form of the message. We will define the cellular and sub-cellular localization of the 27kD vbGH protein to better understand the biological consequences of this form of alternative splicing. 1) Mutation of the 5' splice site and an adjacent """"""""pseudo 5' splice site"""""""" will be used to define the essential features of these sequences in determining the levels of alternative splicing in transfected cells and early spliceosome complex formation in vitro. A core 10-nucleotide sequence contained within a positive element in the downstream exon will be systematically mutated to test the hypothesis that this signal stimulates intron removal via an interaction with U1 snRNP. 2) UV-crosslinking and gel-retardation assays will be used to identify those splicing factor(s) which directly interact with the positive exonic sequence. Purified splicing factors and mutated forms of these factors will be used in vitro to define the observed antagonistic effects of splicing factors SF2 and hnRNP-A1 on the splicing of this bGH intron. 3) The sub-cellular localization and possible post-translational modification of the vbGH protein will be examined in transfected cells and the bovine pituitary by immunocytochemical and Western blot techniques utilizing anti-vbGH-specific monoclonal antibodies. The developmental expression of vbGH in the pituitary and recent observation of vbGH expression in ovarian tissue will be characterized at both the RNA and protein levels. Receptor binding studies and somatotroph specific transgenic expression of vbGH will ultimately be employed to probe its potential biological role. Alternative splicing is a common form of post-transcriptional regulation of gene expression which is only partially understood at the molecular level. The alternative splicing of the last intron of bGH pre-mRNA provides an opportunity to clarify the roles of multiple RNA signals and interacting splicing factors while probing the biological implications of this novel hormone isoform.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK032770-12
Application #
2138868
Study Section
Biochemistry Study Section (BIO)
Project Start
1983-08-01
Project End
1997-07-31
Budget Start
1994-08-01
Budget End
1995-07-31
Support Year
12
Fiscal Year
1994
Total Cost
Indirect Cost
Name
Case Western Reserve University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
077758407
City
Cleveland
State
OH
Country
United States
Zip Code
44106
Li, X; Shambaugh, M E; Rottman, F M et al. (2000) SR proteins Asf/SF2 and 9G8 interact to activate enhancer-dependent intron D splicing of bovine growth hormone pre-mRNA in vitro. RNA 6:1847-58
Dirksen, W P; Li, X; Mayeda, A et al. (2000) Mapping the SF2/ASF binding sites in the bovine growth hormone exonic splicing enhancer. J Biol Chem 275:29170-7
Stallings-Mann, M L; Ludwiczak, R L; Klinger, K W et al. (1996) Alternative splicing of exon 3 of the human growth hormone receptor is the result of an unusual genetic polymorphism. Proc Natl Acad Sci U S A 93:12394-9
Dirksen, W P; Sun, Q; Rottman, F M (1995) Multiple splicing signals control alternative intron retention of bovine growth hormone pre-mRNA. J Biol Chem 270:5346-52
Dirksen, W P; Hampson, R K; Sun, Q et al. (1994) A purine-rich exon sequence enhances alternative splicing of bovine growth hormone pre-mRNA. J Biol Chem 269:6431-6
Sun, Q; Hampson, R K; Rottman, F M (1993) In vitro analysis of bovine growth hormone pre-mRNA alternative splicing. Involvement of exon sequences and trans-acting factor(s). J Biol Chem 268:15659-66
Sun, Q; Mayeda, A; Hampson, R K et al. (1993) General splicing factor SF2/ASF promotes alternative splicing by binding to an exonic splicing enhancer. Genes Dev 7:2598-608
Salata, R A; Malhotra, I J; Hampson, R K et al. (1992) Application of an immune-tolerizing procedure to generate monoclonal antibodies specific to an alternate protein isoform of bovine growth hormone. Anal Biochem 207:142-9
Goodwin, E C; Rottman, F M (1992) The 3'-flanking sequence of the bovine growth hormone gene contains novel elements required for efficient and accurate polyadenylation. J Biol Chem 267:16330-4
Helms, S R; Rottman, F M (1990) Characterization of an inducible promoter system to investigate decay of stable mRNA molecules. Nucleic Acids Res 18:255-9

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