Non-insulin dependent diabetes mellitus (NIDDM) is a syndrome characterized by defects in insulin secretion and/or insulin action. Both genetic and nongenetic factors contribute to the development of this genetically heterogeneous disorder. The past two years have seen great progress in our understanding of the molecular genetics of maturity-onset diabetes of the young (MODY), an uncommon form of NIDDM characterized by onset usually before age of 25 years and an autosomal dominant mode of inheritance. However, there has been little progress in identifying the genes responsible for the more common late-onset NIDDM which affects more than 95% of all subjects with NIDDM. Studies of """"""""candidate genes"""""""" have contributed relatively little to our understanding of the susceptibility genes involved in the development of late-onset NIDDM and we do not know either how many genes may be involved, their identities, mode of inheritance or how they may interact among themselves and with environmental factors to cause late-onset NIDDM. Because of this uncertainty, it is our intention to systematically screen the human genome for late-onset NIDDM-susceptibility genes using DNA markers separated by 10 cM. Since the volume of work involved in such an endeavor is beyond the scope of a single research grant, four principal investigators (myself and Drs. Pat Concannon, Craig Hanis and Richard Spielman) have submitted separate but related proposals for funding. Each PI (Bell, Concannon, Hanis and Spielman) will use the same set of DNA samples obtained from patients with late-onset NIDDM to systematically screen different regions of the genome for """"""""genes responsible for NIDDM"""""""". The four PIs will share all resources (DNA samples, oligonucleotide primers, etc.) and genotype data. Data management and linkage analyses will be performed on all samples at two of the centers (University of Chicago and University of Texas Health Science Center at Houston). This will allow uniform analyses to be performed on all the markers typed by each group including conditional analyses. The latter approach takes into account data at other loci such as those for candidate genes (eg. insulin, insulin receptor and glucokinase genes) or previously identified susceptibility regions in assessing evidence for linkage at marker(s) in the newly identified susceptibility regions. The advantage of the proposed collaborative approach is that it will allow the entire genome to be screened for susceptibility genes efficiently and rapidly. It is important to stress that the entire genome will be screened for NIDDM-susceptibility genes. The linkage studies will not be discontinued to concentrate on cloning susceptibility loci once they have been identified. It is anticipated that the identification of the NIDDM-susceptibility genes will lead to a better understanding of the molecular basis of this disorder. The results of the study will also enable the identification of at-risk subjects before the onset of clinical disease as well as lead to the development of new treatment strategies based upon an understanding of the underlying molecular defects.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
3R01DK047486-05S3
Application #
6095834
Study Section
Diabetes, Endocrinology and Metabolic Diseases B Subcommittee (DDK)
Program Officer
Mckeon, Catherine T
Project Start
1993-09-30
Project End
1999-09-29
Budget Start
1997-09-30
Budget End
1999-09-29
Support Year
5
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Chicago
Department
Biochemistry
Type
Schools of Medicine
DUNS #
225410919
City
Chicago
State
IL
Country
United States
Zip Code
60637
Kawai, Toshihide; Ng, Maggie C Y; Hayes, M Geoffrey et al. (2009) Variation in the perilipin gene (PLIN) affects glucose and lipid metabolism in non-Hispanic white women with and without polycystic ovary syndrome. Diabetes Res Clin Pract 86:186-92
Norton, L; Parr, T; Bardsley, R G et al. (2007) Characterization of GLUT4 and calpain expression in healthy human skeletal muscle during fasting and refeeding. Acta Physiol (Oxf) 189:233-40
Hayes, M Geoffrey; Pluzhnikov, Anna; Miyake, Kazuaki et al. (2007) Identification of type 2 diabetes genes in Mexican Americans through genome-wide association studies. Diabetes 56:3033-44
Nicolae, Dan L; Wu, Xiaolin; Miyake, Kazuaki et al. (2006) GEL: a novel genotype calling algorithm using empirical likelihood. Bioinformatics 22:1942-7
Tsuchiya, Takafumi; Schwarz, Peter E H; Bosque-Plata, Laura Del et al. (2006) Association of the calpain-10 gene with type 2 diabetes in Europeans: results of pooled and meta-analyses. Mol Genet Metab 89:174-84
Pihlajamaki, J; Salmenniemi, U; Vanttinen, M et al. (2006) Common polymorphisms of calpain-10 are associated with abdominal obesity in subjects at high risk of type 2 diabetes. Diabetologia 49:1560-6
Hayes, M Geoffrey; del Bosque-Plata, Laura; Tsuchiya, Takafumi et al. (2005) Patterns of linkage disequilibrium in the type 2 diabetes gene calpain-10. Diabetes 54:3573-6
Ng, M C Y; Miyake, K; So, W Y et al. (2005) The linkage and association of the gene encoding upstream stimulatory factor 1 with type 2 diabetes and metabolic syndrome in the Chinese population. Diabetologia 48:2018-24
Grasberger, Helmut; Ye, Honggang; Mashima, Hirosato et al. (2005) Dual promoter structure of ZFP106: regulation by myogenin and nuclear respiratory factor-1. Gene 344:143-59
Ng, Maggie C Y; So, Wing-Yee; Lam, Vincent K L et al. (2004) Genome-wide scan for metabolic syndrome and related quantitative traits in Hong Kong Chinese and confirmation of a susceptibility locus on chromosome 1q21-q25. Diabetes 53:2676-83

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