This is a continuing proposal, for a comprehensive study of the biochemical and molecular basis of ornithine transcarbamylase (OTC) deficiency, an X-linked disorder, and the most common inherited defect of ureagenesis. Its focus is to increase understanding of structure- function relationships of the OTC enzyme (OTCase) and the biochemical and molecular basis of OTC deficiency. This study will employ bacterial and mammalian cell expression systems to investigate the effects of naturally occurring mutations on the synthesis, processing and catalytic function of human OTCase. To develop gene therapy approaches for certain mutants, we will investigate the assembly and biochemical properties of """"""""chimeric"""""""" OTCase holoenzymes composed of wild type and mutant polypeptides. The crystal structures of the wild type human OTCase and several naturally occurring mutant enzymes will be refined and their catalytic mechanism will be investigated. Simultaneously, we will continue to expand the genotype-phenotype clinical database of OTC deficiency and will continue to provide updated information on the World Wide Web in a site dedicated to this disorder (www.peds.umn.edu/otc). The project has the following specific aims: (1) Study the enzymatic and physical properties of OTCase """"""""chimeric"""""""" holoenzymes that contain both wild type and mutant polypeptides. (2) Perform expression studies of naturally occurring OTCase mutants in Chinese Hamster ovary (CHO) cells. (3) Complete the crystal structure determination of wild type and R277W and R277Q mutant human OTCase, determine the crystal structures of human OTCase complexed with various ligands and investigate the catalytic mechanism in solution. (4) Continue to expand our clinical database by characterizing molecular and biochemical defects in the OTC genes and enzymes of a large patient population with OTC deficiency. The ultimate goal is to help families with OTC deficiency with accurate diagnosis, reliable carrier testing and prenatal diagnosis and development of better treatment, especially gene therapy, through a better understanding of biochemistry and molecular biology of OTC deficiency.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK047870-07
Application #
6380867
Study Section
Medical Biochemistry Study Section (MEDB)
Program Officer
Mckeon, Catherine T
Project Start
1995-08-01
Project End
2002-07-31
Budget Start
2001-08-01
Budget End
2002-07-31
Support Year
7
Fiscal Year
2001
Total Cost
$251,182
Indirect Cost
Name
Children's Research Institute
Department
Type
DUNS #
City
Washington
State
DC
Country
United States
Zip Code
20010
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Shi, Dashuang; Yu, Xiaolin; Zhao, Gengxiang et al. (2012) Crystal structure and biochemical properties of putrescine carbamoyltransferase from Enterococcus faecalis: Assembly, active site, and allosteric regulation. Proteins 80:1436-47
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Li, Yongdong; Yu, Xiaolin; Ho, Jeremy et al. (2010) Reversible post-translational carboxylation modulates the enzymatic activity of N-acetyl-L-ornithine transcarbamylase. Biochemistry 49:6887-95
Caldovic, Ljubica; Ah Mew, Nicholas; Shi, Dashuang et al. (2010) N-acetylglutamate synthase: structure, function and defects. Mol Genet Metab 100 Suppl 1:S13-9
Ah Mew, Nicholas; McCarter, Robert; Daikhin, Yevgeny et al. (2010) N-carbamylglutamate augments ureagenesis and reduces ammonia and glutamine in propionic acidemia. Pediatrics 126:e208-14
Ah Mew, Nicholas; Payan, Irma; Daikhin, Yevgeny et al. (2009) Effects of a single dose of N-carbamylglutamate on the rate of ureagenesis. Mol Genet Metab 98:325-30

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