N-acetylglutamate (NAG) is an essential allosteric activator of carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. However, the study of this system has been hampered by lack of information on the mammalian NAGS gene. Our recent cloning of the mouse and human N-acetylglutamate synthase (NAGS) genes, characterization of their structures, purification of the respective recombinant proteins and development of accurate methods to measure NAG and NAGS activity now permit investigations on the role of this enzyme in health and disease.
The specific aims of this study are: 1. To determine domains critical to catalytic function of recombinant human NAGS using random mutagenesis. Chemical and PCR mutagenesis will be used to alter the human NAGS gene, followed by complementation in NAGS deficient E. coil (NK5992) and yeast arg2 strains and biochemical studies of the recombinant mutant enzymes. 2. To characterize the mouse and human NAGS mitochondrial targeting signal (MTS). Affinity purification of native mouse and human liver NAGS will be used to determine the amino-terminus. Subsequently, N-terminal deletion and fusion NAGS constructs will be used for complementation in yeast and for expression studies in Chinese Hamster ovary cells. 3. To determine the 3-D structures of E. coil, human and/or mouse NAGS and to investigate the structures of the active site and their catalytic and regulation mechanisms. Crystals of E. coli and mammalian NAGS will be obtained and crystallographic studies will be performed to determine the structure and propose a catalytic mechanism. 4. To develop a knockout mouse for NAGS deficiency and to characterize its phenotype. We will investigate if this mouse could become a conditional hyperammonemia model while on and off carbamylglutamate, a stable functional analog of NAG. 5. To investigate the molecular basis for inherited NAGS deficiency and study genotype/phenotype correlation of the molecular defects. Patients with hyperammonemia will be screened for mutations in the NAGS gene and the mutations found will be characterized and correlated with the clinical and biochemical phenotype, including stable isotope studies for residual ureagenesis capacity.

Agency
National Institute of Health (NIH)
Institute
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Type
Research Project (R01)
Project #
5R01DK064913-03
Application #
6927904
Study Section
Special Emphasis Panel (ZRG1-SSS-2 (04))
Program Officer
Mckeon, Catherine T
Project Start
2003-08-15
Project End
2007-06-30
Budget Start
2005-07-01
Budget End
2006-06-30
Support Year
3
Fiscal Year
2005
Total Cost
$309,225
Indirect Cost
Name
Children's Research Institute
Department
Type
DUNS #
143983562
City
Washington
State
DC
Country
United States
Zip Code
20010
Williams, Monique; Burlina, Alberto; Rubert, Laura et al. (2018) N-Acetylglutamate Synthase Deficiency Due to a Recurrent Sequence Variant in the N-acetylglutamate Synthase Enhancer Region. Sci Rep 8:15436
Shi, Dashuang; Zhao, Gengxiang; Ah Mew, Nicholas et al. (2017) Precision medicine in rare disease: Mechanisms of disparate effects of N-carbamyl-l-glutamate on mutant CPS1 enzymes. Mol Genet Metab 120:198-206
Haskins, N; Mumo, A; Brown, P H et al. (2016) Effect of arginine on oligomerization and stability of N-acetylglutamate synthase. Sci Rep 6:38711
Zhao, Gengxiang; Jin, Zhongmin; Allewell, Norma M et al. (2015) Structures of the N-acetyltransferase domain of Xylella fastidiosa N-acetyl-L-glutamate synthase/kinase with and without a His tag bound to N-acetyl-L-glutamate. Acta Crystallogr F Struct Biol Commun 71:86-95
Shi, Dashuang; Allewell, Norma M; Tuchman, Mendel (2015) From Genome to Structure and Back Again: A Family Portrait of the Transcarbamylases. Int J Mol Sci 16:18836-64
Shi, Dashuang; Allewell, Norma M; Tuchman, Mendel (2015) The N-Acetylglutamate Synthase Family: Structures, Function and Mechanisms. Int J Mol Sci 16:13004-22
Ah Mew, Nicholas; McCarter, Robert; Daikhin, Yevgeny et al. (2014) Augmenting ureagenesis in patients with partial carbamyl phosphate synthetase 1 deficiency with N-carbamyl-L-glutamate. J Pediatr 165:401-403.e3
Caldovic, Ljubica; Haskins, Nantaporn; Mumo, Amy et al. (2014) Expression pattern and biochemical properties of zebrafish N-acetylglutamate synthase. PLoS One 9:e85597
Zhao, Gengxiang; Allewell, Norma M; Tuchman, Mendel et al. (2013) Structure of the complex of Neisseria gonorrhoeae N-acetyl-L-glutamate synthase with a bound bisubstrate analog. Biochem Biophys Res Commun 430:1253-8
Cartagena, A; Prasad, A N; Rupar, C A et al. (2013) Recurrent encephalopathy: NAGS (N-acetylglutamate synthase) deficiency in adults. Can J Neurol Sci 40:3-9

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