The kidney has an inherent ability to regenerate following damage. This repair is concomitant with the expression of transcription factor genes such as Pax2 and Lhx1, which are essential for initiating normal kidney organogenesis, suggesting that regenerating tubular cells arise from cells with a primitive, progenitor-like state. Renal progenitors may be formed following the 're-programming'of tubular epithelial cells, such as in mammals, or from cells that permanently reside in the kidney, such as in the adult zebrafish. We hypothesize that any treatment that expands or enhances renal progenitors will accelerate the rate of recovery following acute kidney injury (AKI). To test this we developed larval and adult models of AKI in zebrafish and developed unique tools and methodologies to manipulate renal progenitors. We performed a high-content screen to identify compounds that enhance renal progenitor cell number and identified a novel class of histone deacetylase inhibitors (HDACis) that accelerates renal recovery in zebrafish and mouse models of AKI when given after the induction of injury. The proposed work is divided into three specific aims, which take advantage of the complementary expertise of investigators at two different institutions.
Aim 1 : We will test whether HDAC inhibition accelerates the rate of recovery following AKI by inducing the proliferation of renal progenitor cells and/or the expression of genes involved in kidney organogenesis.
Aim 2 : We will determine the importance of Pax2/Pax8 and Lhx1 during normal kidney organogenesis and during the regenerative response by performing loss-of-function and gain-of-function experiments.
Aim 3 : We wil identify cofactors that comprise the Lhx1 transcriptional complex in order to better understand how this critical factor is involved in activating a kidney program in renal progenitors.

Public Health Relevance

Acute kidney injury (AKI) is a common and largely reversible disorder that has a high mortality but for which there is no specific treatment in humans. Our studies have identified (A) a new class of histone deacetylase inhibitors that accelerate the rate of renal recovery following AKI and (B) a renal progenitor cell population in the adult zebrafish that regenerates damaged kidney tissue. The purpose of our proposed studies is to determine the molecular mechanism by which these agents act to enhance renal regeneration with the ultimate goal of developing new therapies to treat AKI.

National Institute of Health (NIH)
National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK)
Research Project (R01)
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Pathobiology of Kidney Disease Study Section (PBKD)
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Hoshizaki, Deborah K
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University of Pittsburgh
Anatomy/Cell Biology
Schools of Medicine
United States
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Wen, Xiaoyan; Cui, Liyan; Morrisroe, Seth et al. (2018) A zebrafish model of infection-associated acute kidney injury. Am J Physiol Renal Physiol 315:F291-F299
Espiritu, Eugenel B; Crunk, Amanda E; Bais, Abha et al. (2018) The Lhx1-Ldb1 complex interacts with Furry to regulate microRNA expression during pronephric kidney development. Sci Rep 8:16029
Han, Hwa I; Skvarca, Lauren B; Espiritu, Eugenel B et al. (2018) The role of macrophages during acute kidney injury: destruction and repair. Pediatr Nephrol :
Cerqueira, D├ębora M; Bodnar, Andrew J; Phua, Yu Leng et al. (2017) Bim gene dosage is critical in modulating nephron progenitor survival in the absence of microRNAs during kidney development. FASEB J 31:3540-3554
Skrypnyk, Nataliya I; Sanker, Subramaniam; Skvarca, Lauren Brilli et al. (2016) Delayed treatment with PTBA analogs reduces postinjury renal fibrosis after kidney injury. Am J Physiol Renal Physiol 310:F705-F716
Chiba, Takuto; Skrypnyk, Nataliya I; Skvarca, Lauren Brilli et al. (2016) Retinoic Acid Signaling Coordinates Macrophage-Dependent Injury and Repair after AKI. J Am Soc Nephrol 27:495-508
Naylor, Richard W; Skvarca, Lauren Brilli; Thisse, Christine et al. (2016) BMP and retinoic acid regulate anterior-posterior patterning of the non-axial mesoderm across the dorsal-ventral axis. Nat Commun 7:12197
Cirio, Maria Cecilia; de Caestecker, Mark P; Hukriede, Neil A (2015) Zebrafish Models of Kidney Damage and Repair. Curr Pathobiol Rep 3:163-170
Chiba, Takuto; Hukriede, Neil; de Caestecker, Mark P (2015) Kidney Regeneration: Lessons from Development. Curr Pathobiol Rep 3:67-79
Diep, Cuong Q; Peng, Zhenzhen; Ukah, Tobechukwu K et al. (2015) Development of the zebrafish mesonephros. Genesis 53:257-69

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