Receptors are a diversified class of membrane proteins which in the rod cell includes rhodopsin, a member of the G-protein linked receptor family and the cyclic-GMP activated cation channel. A variety of other receptors such as the nicotinic acetylcholine receptor are also important in the functioning of the retina. While the roles of such receptors in cellular function are becoming increasingly well defined in no case has the detailed molecular mechanism of any receptor protein yet been elucidated. The general goal of this project is the development of FTIR based methods to obtain detailed molecular information about receptor function at the level of individual amino acid residues. In the past funding period important progress has been made in this direction which includes: a) Measurement of the FTIR difference spectra for all of the steps in the rhodopsin photocascade. b) The first FTIR measurements on a non-light triggered receptor. c) Demonstration that receptors can be studied under physiological conditions. d) Utilization of mutants for band assignments and structure-function studies. e) Development of advanced FTIR techniques for receptor studies. We propose to utilize these novel techniques to investigate a variety of retina based receptors as well as model polypeptides in the next funding period. In the case of rhodopsin, these studies will aim at determining structural changes in key residues involved in color regulation, G-protein activation, phosphorylation, protein insertion and folding. The interaction of rhodopsin with other components in the visual signal-transduction system such as the G-protein, rhodopsin kinase and arrestin will also be investigated. Possible common mechanisms which underlie receptor function will be studied by focusing on a variety of other suitable receptors and model system including sensory rhodopsin I, the nicotinic acetylcholine receptor, the colicin E1 channel fragment and synthetic polypeptides. Our recent work has revealed spectroscopic features which are shared by this diverse group of receptors. One possibility is that ligand binding, light absorption, voltage-dependent changes and pH alterations all result in the modulation of the ionization states of specific buried Asp/Glu residues that cause a change in the interaction and orientation of transmembrane alpha-helices. These studies will also provide a basis for studying at a molecular level the effects of anesthetics, drugs and other soluble molecules on receptor function. In general, the novel approaches being developed in this project should have an important impact on future understanding of a wide variety of signal-transduction systems in biology.

Agency
National Institute of Health (NIH)
Institute
National Eye Institute (NEI)
Type
Research Project (R01)
Project #
2R01EY005499-09
Application #
3260614
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Project Start
1984-08-01
Project End
1997-07-31
Budget Start
1993-08-01
Budget End
1994-07-31
Support Year
9
Fiscal Year
1993
Total Cost
Indirect Cost
Name
Boston University
Department
Type
Schools of Arts and Sciences
DUNS #
604483045
City
Boston
State
MA
Country
United States
Zip Code
02118
Bergo, Vladislav; Amsden, Jason J; Spudich, Elena N et al. (2004) Structural changes in the photoactive site of proteorhodopsin during the primary photoreaction. Biochemistry 43:9075-83
Bergo, Vladislav; Spudich, Elena N; Spudich, John L et al. (2002) A Fourier transform infrared study of Neurospora rhodopsin: similarities with archaeal rhodopsins. Photochem Photobiol 76:341-9
Rath, P; Bovee-Geurts, P H; DeGrip, W J et al. (1994) Photoactivation of rhodopsin involves alterations in cysteine side chains: detection of an S-H band in the Meta I-->Meta II FTIR difference spectrum. Biophys J 66:2085-91
Rath, P; Olson, K D; Spudich, J L et al. (1994) The Schiff base counterion of bacteriorhodopsin is protonated in sensory rhodopsin I: spectroscopic and functional characterization of the mutated proteins D76N and D76A. Biochemistry 33:5600-6
Baenziger, J E; Miller, K W; Rothschild, K J (1993) Fourier transform infrared difference spectroscopy of the nicotinic acetylcholine receptor: evidence for specific protein structural changes upon desensitization. Biochemistry 32:5448-54
He, Y; Krebs, M P; Fischer, W B et al. (1993) FTIR difference spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: detection of a stable O-like species and characterization of its photocycle at low temperature. Biochemistry 32:2282-90
Sonar, S; Krebs, M P; Khorana, H G et al. (1993) Static and time-resolved absorption spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: evidence for an equilibrium between bR570 and an O-like species. Biochemistry 32:2263-71
Rath, P; Krebs, M P; He, Y et al. (1993) Fourier transform Raman spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: formation of a stable O-like species during light adaptation and detection of its transient N-like photoproduct. Biochemistry 32:2272-81
Rath, P; DeCaluwe, L L; Bovee-Geurts, P H et al. (1993) Fourier transform infrared difference spectroscopy of rhodopsin mutants: light activation of rhodopsin causes hydrogen-bonding change in residue aspartic acid-83 during meta II formation. Biochemistry 32:10277-82
Bousche, O; Sonar, S; Krebs, M P et al. (1992) Time-resolved Fourier transform infrared spectroscopy of the bacteriorhodopsin mutant Tyr-185-->Phe: Asp-96 reprotonates during O formation;Asp-85 and Asp-212 deprotonate during O decay. Photochem Photobiol 56:1085-95

Showing the most recent 10 out of 30 publications