The general objectives of this research are to elucidate the mechanisms and stereochemistry of important reactions in terpene and sterol biosynthesis by chemical synthesis of potential or known enzyme inhibitors, by synthesis of poroiposed intermediates, by stereospecific labeling experiments, and by investigations of biomimetic model reactions. Evaluations of the enzyme inhibitors and biosynthesis with labeled substrates will be performed via collaborations with several biochemical laboratories.
The specific aims are summarized below: A. Synthesis of the cyclobutyl disphosphate (PP) isomer of presqualene, aza and carbocyclic PP mimics of intermediates, and the bicyclic ketal triaci core of the squalestatins for evaluation as squalene synthase inhibitors. B. Synthesis of C30 botyrococcene and testing of the preceding squalene synthase inhibitors against botyrococcene synthase. C. Synthesis of aza, phosphonyl, and fluoro analogs of geranylgeranyl diphosphate (GGPP) for evaluation as inhibitors or modified substrates of protein GG transferase (PGGT) and GGPP synthase. D. Determination of the stereochemistry of the CH3->CH2 eliminations in camphene and pinene biosynthesis and the 1,2-hydride shift in sabinene hydrate biosynthesis. E. Investigation of the carbocation rearrangements of silphinyl and caryophyllenyl derivatives as model reactions for cyclopentanoid sesquiterpene biogenesis. F. Study of the catalytic mechanism of skeletal and allylic PP rearrangements as models for terpene cyclase catalysis. High affinity inhibitors of squalene synthase are potentially useful as therapeutic agents for controlling the rate of cholesterol biosynthesis, and avoiding interference with other essential isoprenoid metabolites. Specific PGGT and GGPP synthase inhibitors would have significant biochemical applications as agents that block the prenylation step in the activation of many regulatory and signal-transducing proteins. The fundamental knowledge gained from this research will enhance our understanding of the specificities and catalytic mechanisms of important enzymes associated with the isoprenoid biosynthetic pathway.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM013956-29
Application #
2168807
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Project Start
1979-03-01
Project End
1997-02-28
Budget Start
1994-03-01
Budget End
1995-02-28
Support Year
29
Fiscal Year
1994
Total Cost
Indirect Cost
Name
University of Illinois Urbana-Champaign
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
041544081
City
Champaign
State
IL
Country
United States
Zip Code
61820
Faraldos, Juan A; Coates, Robert M; Giner, José-Luis (2013) Alternative synthesis of the Colorado potato beetle pheromone. J Org Chem 78:10548-54
Faraldos, Juan A; Kariuki, Benson M; Coates, Robert M (2011) 2-azapinanes: aza analogues of the enantiomeric pinyl carbocation intermediates in pinene biosynthesis. Org Lett 13:836-9
Köksal, Mustafa; Jin, Yinghua; Coates, Robert M et al. (2011) Taxadiene synthase structure and evolution of modular architecture in terpene biosynthesis. Nature 469:116-20
Faraldos, Juan A; O'Maille, Paul E; Dellas, Nikki et al. (2010) Bisabolyl-derived sesquiterpenes from tobacco 5-epi-aristolochene synthase-catalyzed cyclization of (2Z,6E)-farnesyl diphosphate. J Am Chem Soc 132:4281-9
Faraldos, Juan A; Wu, Shuiqin; Chappell, Joe et al. (2010) Doubly deuterium-labeled patchouli alcohol from cyclization of singly labeled [2-(2)H(1)]farnesyl diphosphate catalyzed by recombinant patchoulol synthase. J Am Chem Soc 132:2998-3008
Mann, Francis M; Prisic, Sladjana; Hu, Huayou et al. (2009) Characterization and inhibition of a class II diterpene cyclase from Mycobacterium tuberculosis: implications for tuberculosis. J Biol Chem 284:23574-9
Hu, Huayou; Faraldos, Juan A; Coates, Robert M (2009) Scope and mechanism of intramolecular aziridination of cyclopent-3-enyl-methylamines to 1-azatricyclo[2.2.1.0(2,6)]heptanes with lead tetraacetate. J Am Chem Soc 131:11998-2006
Faraldos, Juan A; Wu, Shuiqin; Chappell, Joe et al. (2007) Conformational Analysis of (+)-Germacrene A by Variable Temperature NMR and NOE Spectroscopy. Tetrahedron 63:7733-7742