The biosynthesis of six complex antibiotics of microbial origin will be studied: the macrolides erythromycin and avermectin, the polyether monensin, the saturated polyketide nargenicin, and the sesquiterpenes pentalenolactone and quadrone. Each of these substances is itself representative of a broad class of related natural products. It is expected that the information gained from studying the biosynthesis of these individual metabolites will be applicable to an understanding of the formation of their parent structural families as well. A series of experiments using intact cells, cell-free extracts, and blocked mutants and exploiting a variety of modern 13C NMR techniques, including 13C180 isotope shifts, 13C 2H decoupling, and 13C13C multiple labeling will be used to investigate the mechanism and sterechemistry of the key chain-elongation and ring-forming steps of a variety of important polyketide antibiotics for which erythromycin, avermectin, monensin, and nargenicin may be taken as prototypes. A recently developed cell-free cyclase will be used to study the biosynthesis of the sesquiterpene pentalenolactone and to test a stereochemical model for the formation of humulene-derived sesquiterpenes. This model will be extend to a study of the biosynthesis of the novel sesquiterpene antibiotic quadrone. The goals are not only to elucidate characteristic precursor-product relationships and to deduce particular biosynthetic pathways, but to establish the details of the key bond-forming and bond-breaking reactions by which simple precursors are converted to complex natural products. In carrying out these investigations we also hope to continue to develop experimental tools which will be broadly applicable to biosynthetic studies in general.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM022172-12
Application #
3270983
Study Section
(SSS)
Project Start
1977-08-01
Project End
1988-07-31
Budget Start
1986-08-01
Budget End
1987-07-31
Support Year
12
Fiscal Year
1986
Total Cost
Indirect Cost
Name
Brown University
Department
Type
Schools of Arts and Sciences
DUNS #
001785542
City
Providence
State
RI
Country
United States
Zip Code
02912
Xie, Xinqiang; Cane, David E (2018) Stereospecific Formation of Z-Trisubstituted Double Bonds by the Successive Action of Ketoreductase and Dehydratase Domains from trans-AT Polyketide Synthases. Biochemistry 57:3126-3129
Xie, Xinqiang; Cane, David E (2018) pH-Rate profiles establish that polyketide synthase dehydratase domains utilize a single-base mechanism. Org Biomol Chem 16:9165-9170
Xie, Xinqiang; Khosla, Chaitan; Cane, David E (2017) Elucidation of the Stereospecificity of C-Methyltransferases from trans-AT Polyketide Synthases. J Am Chem Soc 139:6102-6105
Shah, Dhara D; You, Young-Ok; Cane, David E (2017) Stereospecific Formation of E- and Z-Disubstituted Double Bonds by Dehydratase Domains from Modules 1 and 2 of the Fostriecin Polyketide Synthase. J Am Chem Soc 139:14322-14330
Xie, Xinqiang; Garg, Ashish; Khosla, Chaitan et al. (2017) Mechanism and Stereochemistry of Polyketide Chain Elongation and Methyl Group Epimerization in Polyether Biosynthesis. J Am Chem Soc 139:3283-3292
Xie, Xinqiang; Garg, Ashish; Khosla, Chaitan et al. (2017) Elucidation of the Cryptic Methyl Group Epimerase Activity of Dehydratase Domains from Modular Polyketide Synthases Using a Tandem Modules Epimerase Assay. J Am Chem Soc 139:9507-9510
Robbins, Thomas; Kapilivsky, Joshuah; Cane, David E et al. (2016) Roles of Conserved Active Site Residues in the Ketosynthase Domain of an Assembly Line Polyketide Synthase. Biochemistry 55:4476-84
Robbins, Thomas; Liu, Yu-Chen; Cane, David E et al. (2016) Structure and mechanism of assembly line polyketide synthases. Curr Opin Struct Biol 41:10-18
Ostrowski, Matthew P; Cane, David E; Khosla, Chaitan (2016) Recognition of acyl carrier proteins by ketoreductases in assembly line polyketide synthases. J Antibiot (Tokyo) 69:507-10
Xie, Xinqiang; Garg, Ashish; Keatinge-Clay, Adrian T et al. (2016) Epimerase and Reductase Activities of Polyketide Synthase Ketoreductase Domains Utilize the Same Conserved Tyrosine and Serine Residues. Biochemistry 55:1179-86

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