Systemic and regional heparinization, to modulate blood coagulation, has played a central role in modern medicine and surgery. However, severe complications can occur due to heparinization. Although many different approaches have been attempted to address this issue, heparin neutralization in blood remains a serious problem. We have been studying and developing a heparin neutralization system (HNS) based on heparinase (E.C.4.2.2.7; an enzyme that specifically depolymerizes heparin). During the past grant period, significant progress has been made in all of the areas proposed in the previous grant application. Specifically we have:1) characterized heparinase at the molecular level, obtained internal peptide sequences, cloned heparinase using Polymerase Chain Reaction, and expressed recombinant heparinase I as a soluble protein in E. coli, 2) designed improved bioreactors and established principles for minimizing blood damage, 3) developed and validated comprehensive in vivo kinetic models to predict reactor performance, and 4) conducted in vivo studies to assess the safety and efficacy of the proposed approach. We believe that there are compelling reasons to address two critical research goals on the heparinase filter. The first area is in improving heparinase stability and capacity in the reactor; the second is in improving the reactor configuration in order to increase the blood flow rate and thus enhance its effectiveness. Our proposed studies involve both in vitro and in vivo studies in these important areas, followed by pre- clinical trials in animal models.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM025810-20
Application #
2654933
Study Section
Surgery and Bioengineering Study Section (SB)
Project Start
1979-01-01
Project End
1999-01-31
Budget Start
1998-02-01
Budget End
1999-01-31
Support Year
20
Fiscal Year
1998
Total Cost
Indirect Cost
Name
Massachusetts Institute of Technology
Department
Engineering (All Types)
Type
Schools of Engineering
DUNS #
City
Cambridge
State
MA
Country
United States
Zip Code
02139
Ameer, G A; Barabino, G; Sasisekharan, R et al. (1999) Ex vivo evaluation of a Taylor-Couette flow, immobilized heparinase I device for clinical application. Proc Natl Acad Sci U S A 96:2350-5
Ameer, G A; Harmon, W; Sasisekharan, R et al. (1999) Investigation of a whole blood fluidized bed Taylor-Couette flow device for enzymatic heparin neutralization. Biotechnol Bioeng 62:602-8
Ameer, G A; Raghavan, S; Sasisekharan, R et al. (1999) Regional heparinization via simultaneous separation and reaction in a novel Taylor-Couette flow device. Biotechnol Bioeng 63:618-24
Sasisekharan, R; Venkataraman, G; Godavarti, R et al. (1996) Heparinase I from Flavobacterium heparinum. Mapping and characterization of the heparin binding domain. J Biol Chem 271:3124-31
Godavarti, R; Cooney, C L; Langer, R et al. (1996) Heparinase I from Flavobacterium heparinum. Identification of a critical histidine residue essential for catalysis as probed by chemical modification and site-directed mutagenesis. Biochemistry 35:6846-52
Ernst, S; Venkataraman, G; Winkler, S et al. (1996) Expression in Escherichia coli, purification and characterization of heparinase I from Flavobacterium heparinum. Biochem J 315 ( Pt 2):589-97
Venkataraman, G; Sasisekharan, V; Herr, A B et al. (1996) Preferential self-association of basic fibroblast growth factor is stabilized by heparin during receptor dimerization and activation. Proc Natl Acad Sci U S A 93:845-50
Shefer, S D; Breslau, J; Langer, R (1995) Computer simulation of low-density lipoprotein removal in the presence of a bioreactor containing phospholipase A2. Biotechnol Prog 11:133-9
Sasisekharan, R; Leckband, D; Godavarti, R et al. (1995) Heparinase I from Flavobacterium heparinum: the role of the cysteine residue in catalysis as probed by chemical modification and site-directed mutagenesis. Biochemistry 34:14441-8
Ernst, S; Langer, R; Cooney, C L et al. (1995) Enzymatic degradation of glycosaminoglycans. Crit Rev Biochem Mol Biol 30:387-444

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