This proposal focuses mainly on the acyl-CoA dehydrogenases and metabolically related enzymes. These flavoproteins have assumed considerable metabolic importance in genetic deficiencies of fatty acid oxidation in humans and in the bioactivation of cytotoxic fatty acids. Three fundamental aspects of acyl-CoA dehydrogenase catalysis will be addressed. First, the role of hydrogen bonding in the polarization of the carbonyl group of acyl-CoA thioesters will be probed using FAD and substrate analogs. These studies will also address the importance of H-bonds in the stabilization of enolate species. Second, the role of desolvation, protonation state and electrostatic interactions within the active site of the acyl-CoA dehydrogenase will be examined by static and rapid reaction studies using native and mutant proteins. The modulation of the oxygen reactivity of flavoproteins is very poorly understood, and so a third goal is to use site directed and random mutagenesis studies to assess whether the acyl-CoA dehydrogenase can be converted to an oxidase by increasing solvent accessibility to the FAD cofactor. Correspondingly, the role of TRP166 in the interaction between the dehydrogenase and electron transfer flavoprotein will be probed.
A fourth aim addresses the mode of action of cytotoxic 4-thia-fatty acid derivatives of halogenated hydrocarbons such as trichloroethylene. The corresponding CoA thioesters are activated by the acyl-CoA dehydrogenase with the release of highly reactive alpha-halo-thiolate species. Characterization of the reactivity of these compounds is important in understanding the cytotoxicity and mutagenicity of these species. Finally, the ultimate oxidant for disulfide bond formation in secreted proteins is still unclear. A new flavoenzyme oxidase isolated from egg white will be characterized and its potential role in disulfide generation will be studied.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM026643-21
Application #
6018504
Study Section
Physical Biochemistry Study Section (PB)
Project Start
1979-07-01
Project End
2000-07-31
Budget Start
1999-08-01
Budget End
2000-07-31
Support Year
21
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Delaware
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
059007500
City
Newark
State
DE
Country
United States
Zip Code
19716
Hudson, Devin A; Caplan, Jeffrey L; Thorpe, Colin (2018) Designing Flavoprotein-GFP Fusion Probes for Analyte-Specific Ratiometric Fluorescence Imaging. Biochemistry 57:1178-1189
Yu, Tiantian; Laird, Joanna R; Prescher, Jennifer A et al. (2018) Gaussia princeps luciferase: a bioluminescent substrate for oxidative protein folding. Protein Sci 27:1509-1517
Fass, Deborah; Thorpe, Colin (2018) Chemistry and Enzymology of Disulfide Cross-Linking in Proteins. Chem Rev 118:1169-1198
Foster, Celia K; Thorpe, Colin (2017) Challenges in the evaluation of thiol-reactive inhibitors of human protein disulfide Isomerase. Free Radic Biol Med 108:741-749
Zhang, Han; Trout, William S; Liu, Shuang et al. (2016) Rapid Bioorthogonal Chemistry Turn-on through Enzymatic or Long Wavelength Photocatalytic Activation of Tetrazine Ligation. J Am Chem Soc 138:5978-83
Hudson, Devin A; Thorpe, Colin (2015) Mia40 is a facile oxidant of unfolded reduced proteins but shows minimal isomerase activity. Arch Biochem Biophys 579:1-7
Sapra, Aparna; Ramadan, Danny; Thorpe, Colin (2015) Multivalency in the inhibition of oxidative protein folding by arsenic(III) species. Biochemistry 54:612-21
Hudson, Devin A; Gannon, Shawn A; Thorpe, Colin (2015) Oxidative protein folding: from thiol-disulfide exchange reactions to the redox poise of the endoplasmic reticulum. Free Radic Biol Med 80:171-82
Israel, Benjamin A; Jiang, Lingxi; Gannon, Shawn A et al. (2014) Disulfide bond generation in mammalian blood serum: detection and purification of quiescin-sulfhydryl oxidase. Free Radic Biol Med 69:129-35
Schaefer-Ramadan, Stephanie; Thorpe, Colin; Rozovsky, Sharon (2014) Site-specific insertion of selenium into the redox-active disulfide of the flavoprotein augmenter of liver regeneration. Arch Biochem Biophys 548:60-5

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