This proposal intends to develop synthetic receptors for studies of molecular recognition, transport and catalysis. The receptors are deep cavitands, molecules that more or less surround their targets and present reactive functional groups to them. Both organic and water-soluble versions are available to study molecular behavior in small spaces and asymmetric nanoenvironments while they are isolated from bulk solvents. The proposal pursues themes of single molecule spectroscopy, of nanoscience and self-assembly. These are the most advanced synthetic analogs of receptors or enzymes that are available and can provide some keys to fathom their extraordinary reactivity and selectivity. The longer-term objectives are transport across membranes and catalysis involving structures of biologically significance. Specific targets include the reactions of choline and trimethyllysine derivatives. Acetylcholine is a major determinant of cognitive performance and of muscle contraction, and in Alzheimer's disease, a large drop of acetylcholine levels is found in several brain regions. Deep cavitands that can carry choline across the blood brain barrier and the neuronal membrane can be of use in upregulating and restoring acetylcholine levels in disease afflicted brains. Gene activation or repression in higher organisms is controlled by modification of histone proteins. These cavitands could allow the identification of genes whose expression is influenced by trimethylation of particular lysines of the histones.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM027932-29
Application #
7779464
Study Section
Synthetic and Biological Chemistry A Study Section (SBCA)
Program Officer
Fabian, Miles
Project Start
1980-04-01
Project End
2011-03-31
Budget Start
2010-04-01
Budget End
2011-03-31
Support Year
29
Fiscal Year
2010
Total Cost
$375,680
Indirect Cost
Name
Scripps Research Institute
Department
Type
DUNS #
781613492
City
La Jolla
State
CA
Country
United States
Zip Code
92037
Ajami, Dariush; Rebek, Julius (2012) Reversibly expanded encapsulation complexes. Top Curr Chem 319:57-78
Sather, Aaron C; Berryman, Orion B; Rebek Jr, Julius (2012) Synthesis of fused indazole ring systems and application to nigeglanine hydrobromide. Org Lett 14:1600-3
Durola, Fabien; Dube, Henry; Ajami, Dariush et al. (2011) Control of Nanospaces with Molecular Devices. Supramol Chem 23:37-41
Lledo, Agusti; Kamioka, Seiji; Sather, Aaron C et al. (2011) Supramolecular architecture with a cavitand-capsule chimera. Angew Chem Int Ed Engl 50:1299-301
Berryman, Orion B; Dube, Henry; Rebek Jr, Julius (2011) Photophysics Applied to Cavitands and Capsules. Isr J Chem 51:700-709
Berryman, Orion B; Sather, Aaron C; Rebek Jr, Julius (2011) A deep cavitand with a fluorescent wall functions as an ion sensor. Org Lett 13:5232-5
Xiao, Shengxiong; Ajami, Dariush; Rebek Jr, Julius (2010) An extended cavitand with an introverted carboxylic acid. Chem Commun (Camb) 46:2459-61
Durola, Fabien; Rebek Jr, Julius (2010) The ouroborand: a cavitand with a coordination-driven switching device. Angew Chem Int Ed Engl 49:3189-91
Busseron, Eric; Rebek Jr, Julius (2010) Guest recognition in a partially bridged deep cavitand. Org Lett 12:4828-31
Pinacho Crisostomo, Fernando R; Lledo, Agusti; Shenoy, Siddhartha R et al. (2009) Recognition and organocatalysis with a synthetic cavitand receptor. J Am Chem Soc 131:7402-10

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