Staphylococcus aureus is a major human pathogen that causes a variety of diseases. Strains of S. aureus have increasingly become resistant to a number of commonly used antibiotics. Rolling-circle replicating (RCR) plasmids are ubiquitous in S. aureus and many other Gram-positive bacteria. These plasmids encode drug resistance and play a major role in the horizontal spread of these genes in nature. We will continue our studies on the replication of one of the best studied RCR plasmid, pT181 of S. aureus. We will generate mutants of the pT181-encoded initiator protein, RepC, and identify its domains involved in the termination of pT181 replication using biochemical approaches. A chromosome-encoded, essential helicase, PcrA, is present in S. aureus and other Gram-positive bacteria. PcrA is required for cell growth and viability, and plasmid rolling-circle (RC) replication. We have shown that it promotes RepC-dependent pT181 DNA unwinding and in vitro replication. We will use both in vitro and in vivo approaches to identify domains of RepC and PcrA that are involved in their interaction. We have shown that the S. aureus PcrA is unusual in that it has equally robust bipolar 5' -> 3' and 3'->5' helicase activities. We plan to study the structure-function relationship of PcrA to identify its domains and enzymatic activities (ssDNA translocation, 5'->3' and 3'->5' helicase, and DNA unwinding) that are important in plasmid replication. Site-directed and random mutants of PcrA will be generated, overexpressed, purified and analyzed for their biochemical activities. PcrA mutants expressed from constitutive promoters will be introduced into strains containing an inducible, wild-type pcrA gene and tested for their ability to support plasmid RC replication under non-inducing conditions. The PcrAS mutant is defective in supporting pT181 replication, but is competent in the replication of plasmids belonging to other RCR families such as pC194, pE194 and pSN2. We will test various pcrA mutants for their ability to support replication of the above plasmids. These studies should provide information on domains of PcrA that are critical for the replication of particular RCR plasmid families and may identify PcrA domains that interact with the initiator proteins of various plasmids. Our studies could provide new avenues for the development of novel drugs targeting RCR plasmids, as well as targeting an essential helicase in S. aureus and other Gram-positive bacteria.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM031685-25
Application #
7447383
Study Section
Prokaryotic Cell and Molecular Biology Study Section (PCMB)
Program Officer
Portnoy, Matthew
Project Start
1982-07-01
Project End
2011-06-30
Budget Start
2008-07-01
Budget End
2011-06-30
Support Year
25
Fiscal Year
2008
Total Cost
$267,528
Indirect Cost
Name
University of Pittsburgh
Department
Genetics
Type
Schools of Medicine
DUNS #
004514360
City
Pittsburgh
State
PA
Country
United States
Zip Code
15213
Fagerburg, Matt V; Schauer, Grant D; Thickman, Karen R et al. (2012) PcrA-mediated disruption of RecA nucleoprotein filaments--essential role of the ATPase activity of RecA. Nucleic Acids Res 40:8416-24
Leuba, Sanford H; Anand, Syam P; Harp, Joel M et al. (2008) Expedient placement of two fluorescent dyes for investigating dynamic DNA protein interactions in real time. Chromosome Res 16:451-67
Anand, Syam P; Zheng, Haocheng; Bianco, Piero R et al. (2007) DNA helicase activity of PcrA is not required for the displacement of RecA protein from DNA or inhibition of RecA-mediated strand exchange. J Bacteriol 189:4502-9
Ruiz-Maso, J A; Anand, S P; Espinosa, M et al. (2006) Genetic and biochemical characterization of the Streptococcus pneumoniae PcrA helicase and its role in plasmid rolling circle replication. J Bacteriol 188:7416-25
Khan, Saleem A (2005) Plasmid rolling-circle replication: highlights of two decades of research. Plasmid 53:126-36
Anand, Syam P; Chattopadhyay, Anasuya; Khan, Saleem A (2005) The PcrA3 mutant binds DNA and interacts with the RepC initiator protein of plasmid pT181 but is defective in its DNA helicase and unwinding activities. Plasmid 54:104-13
Tinsley, Eowyn; Naqvi, Asma; Bourgogne, Agathe et al. (2004) Isolation of a minireplicon of the virulence plasmid pXO2 of Bacillus anthracis and characterization of the plasmid-encoded RepS replication protein. J Bacteriol 186:2717-23
Anand, Syam P; Mitra, Poulami; Naqvi, Asma et al. (2004) Bacillus anthracis and Bacillus cereus PcrA helicases can support DNA unwinding and in vitro rolling-circle replication of plasmid pT181 of Staphylococcus aureus. J Bacteriol 186:2195-9
Naqvi, Asma; Tinsley, Eowyn; Khan, Saleem A (2003) Purification and characterization of the PcrA helicase of Bacillus anthracis. J Bacteriol 185:6633-9
Khan, Saleem A (2003) DNA-protein interactions during the initiation and termination of plasmid pT181 rolling-circle replication. Prog Nucleic Acid Res Mol Biol 75:113-37

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