The goals of this proposal are to further our understanding of the molecular enzymology of the human placental DNA polymerases. The major focus will be on a new type of mammalian DNA polymerase, DNA polymerase Delta, which possesses an associated Delta to 5 ft. exonuclease activity, and is therefore unlike the classical DNA polymerase Alpha. The existence and properties of DNA polymerase Delta in human tissue will be established, and its relationship to other high molecular weight DNA polymerases will be investigated.
The specific aims of the proposal are as follows: The human DNA polymerases Delta and Alpha will be isolated to homogeneity from placental tissue. The enzymes of interest are the DNA polymerase Delta types, of which there are at least two forms, Delta 1 and Delta 2, and polymerase Alpha. The goal is the development of methods for the reproducible isolation of these enzymes from human placenta in their native forms, so as to provide sufficient amounts in the pure state for rigorous characterization. The placental DNA polymerases will be characterized. The subunit structures and physicochemical properties of the DNA polymerases (Delta 1, Delta 2 and Alpha) will be determined and compared. Possible interrelationships will be explored by peptide mapping, and by the use of immunological methods using monoclonal antibodies. The goal is the rigorous description of polymerases Delta 1 and Delta 2, and the determination of their relationships, as well as those, if any, with polymerase Alpha. Attempts will be made to localize the active sites of the exonuclease and polymerase activities of DNA polymerase Delta 1 and Delta 2. The exonuclease and polymerase sites will be labeled by photoaffinity methods using 8-azido-adenosine mono and triphosphates. The goal is to obtain unequivocal evidence that DNA polymerase Delta 1 and Delta 2 each possess two active sites. Monoclonal antibodies against polymerases Delta 1, Delta 2 and Alpha will be made. These antibodies will be used as tools to further the goals above, to prepare affinity columns for the rapid and large scale isolation of these proteins, and to provide tools for the radioimmunoassay and subcellular localization of these enzymes. A long term aim is to study changes of DNA polymerase activity during the cell cycle and also their subcellular localization.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM031973-03
Application #
3280425
Study Section
Biochemistry Study Section (BIO)
Project Start
1983-04-01
Project End
1986-03-31
Budget Start
1985-04-01
Budget End
1986-03-31
Support Year
3
Fiscal Year
1985
Total Cost
Indirect Cost
Name
University of Miami School of Medicine
Department
Type
Schools of Medicine
DUNS #
City
Miami
State
FL
Country
United States
Zip Code
33101
Huehls, Amelia M; Huntoon, Catherine J; Joshi, Poorval M et al. (2016) Genomically Incorporated 5-Fluorouracil that Escapes UNG-Initiated Base Excision Repair Blocks DNA Replication and Activates Homologous Recombination. Mol Pharmacol 89:53-62
Darzynkiewicz, Zbigniew; Zhao, Hong; Zhang, Sufang et al. (2015) Initiation and termination of DNA replication during S phase in relation to cyclins D1, E and A, p21WAF1, Cdt1 and the p12 subunit of DNA polymerase ? revealed in individual cells by cytometry. Oncotarget 6:11735-50
Lee, Marietta Y W T; Zhang, Sufang; Lin, Szu Hua Sharon et al. (2014) The tail that wags the dog: p12, the smallest subunit of DNA polymerase ?, is degraded by ubiquitin ligases in response to DNA damage and during cell cycle progression. Cell Cycle 13:23-31
Zhao, Hong; Zhang, Sufang; Xu, Dazhong et al. (2014) Expression of the p12 subunit of human DNA polymerase ? (Pol ?), CDK inhibitor p21(WAF1), Cdt1, cyclin A, PCNA and Ki-67 in relation to DNA replication in individual cells. Cell Cycle 13:3529-40
Zhang, Sufang; Zhao, Hong; Darzynkiewicz, Zbiegniew et al. (2013) A novel function of CRL4(Cdt2): regulation of the subunit structure of DNA polymerase ? in response to DNA damage and during the S phase. J Biol Chem 288:29550-61
Zhang, Sufang; Zhou, Yajing; Sarkeshik, Ali et al. (2013) Identification of RNF8 as a ubiquitin ligase involved in targeting the p12 subunit of DNA polymerase ? for degradation in response to DNA damage. J Biol Chem 288:2941-50
Walsh, Erin; Wang, Xiaoxiao; Lee, Marietta Y et al. (2013) Mechanism of replicative DNA polymerase delta pausing and a potential role for DNA polymerase kappa in common fragile site replication. J Mol Biol 425:232-43
Wong, Agnes; Zhang, Sufang; Mordue, Dana et al. (2013) PDIP38 is translocated to the spliceosomes/nuclear speckles in response to UV-induced DNA damage and is required for UV-induced alternative splicing of MDM2. Cell Cycle 12:3184-93
Clausen, Anders R; Zhang, Sufang; Burgers, Peter M et al. (2013) Ribonucleotide incorporation, proofreading and bypass by human DNA polymerase ?. DNA Repair (Amst) 12:121-7
Lin, Szu Hua Sharon; Wang, Xiaoxiao; Zhang, Sufang et al. (2013) Dynamics of enzymatic interactions during short flap human Okazaki fragment processing by two forms of human DNA polymerase ?. DNA Repair (Amst) 12:922-35

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