The objective of my research is to determine the mechanisms that control the initiation of protein synthesis in yeast. The goal of this proposal is to describe in genetic and molecular terms sequence and structural complexites in the HIS4 initiator region that govern translational initiation and specific interactions with the components of the translational initiation complex. The following specific aims are directed at achieving this goal: 1) The HIS4 translational initiation region will be systematically mutated emphasizing simple base changes in the non-coding sequences and insertion of secondary structure that might affect ribosomal recognition of the mRNA, scanning of the leader and ribosomal selection of the AUG start condon. 2) These translationally defective mutants will then be used in reversion tests which restore the ability to express HIS4 using an effective selection scheme to identify external suppressors. These external suppressors should define components of the initiation complex that have altered specificities for the mutant HIS4 region and therefore represent gene products that interact with the mRNA in a specific manner. 3) These external suppressors will be rigorously characterized genetically and in conjunction with the previously isolated sui1, sui2, and SUI3 external suppressors of initiator condon mutations at HIS4 and the cloned tRNA-1-MET gene will be characterized at the molecular and biochemical level to determine the mechanism of suppression and the function of the suppressor gene products. Furthermore, the genetic identification of the components of the translational initiation complex will enable us to construct probes and devise genetic selection schemes that will allow a comprehensive analysis of the expression and regulation of their essential gene products. This work should be directly related to many studies in higher eukaryotes contributing valuable information into the basic control mechanisms that determine proper and efficient gene expression and may provide important insight into mechanisms that coordinate hormal cellular growth in yeast.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM032263-05
Application #
3280943
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1983-07-01
Project End
1989-06-30
Budget Start
1987-07-01
Budget End
1988-06-30
Support Year
5
Fiscal Year
1987
Total Cost
Indirect Cost
Name
Northwestern University at Chicago
Department
Type
School of Medicine & Dentistry
DUNS #
005436803
City
Chicago
State
IL
Country
United States
Zip Code
60611
Asano, Katsura; Phan, Lon; Krishnamoorthy, Thanuja et al. (2002) Analysis and reconstitution of translation initiation in vitro. Methods Enzymol 351:221-47
Lo, H J; Huang, H K; Donahue, T F (1998) RNA polymerase I-promoted HIS4 expression yields uncapped, polyadenylated mRNA that is unstable and inefficiently translated in Saccharomyces cerevisiae. Mol Cell Biol 18:665-75
Huang, H K; Yoon, H; Hannig, E M et al. (1997) GTP hydrolysis controls stringent selection of the AUG start codon during translation initiation in Saccharomyces cerevisiae. Genes Dev 11:2396-413
Naranda, T; MacMillan, S E; Donahue, T F et al. (1996) SUI1/p16 is required for the activity of eukaryotic translation initiation factor 3 in Saccharomyces cerevisiae. Mol Cell Biol 16:2307-13
Svejstrup, J Q; Wang, Z; Feaver, W J et al. (1995) Different forms of TFIIH for transcription and DNA repair: holo-TFIIH and a nucleotide excision repairosome. Cell 80:21-8
Feng, L; Yoon, H; Donahue, T F (1994) Casein kinase II mediates multiple phosphorylation of Saccharomyces cerevisiae eIF-2 alpha (encoded by SUI2), which is required for optimal eIF-2 function in S. cerevisiae. Mol Cell Biol 14:5139-53
Yoon, H J; Donahue, T F (1992) The suil suppressor locus in Saccharomyces cerevisiae encodes a translation factor that functions during tRNA(iMet) recognition of the start codon. Mol Cell Biol 12:248-60
Gulyas, K D; Donahue, T F (1992) SSL2, a suppressor of a stem-loop mutation in the HIS4 leader encodes the yeast homolog of human ERCC-3. Cell 69:1031-42
Dever, T E; Feng, L; Wek, R C et al. (1992) Phosphorylation of initiation factor 2 alpha by protein kinase GCN2 mediates gene-specific translational control of GCN4 in yeast. Cell 68:585-96
Yoon, H; Miller, S P; Pabich, E K et al. (1992) SSL1, a suppressor of a HIS4 5'-UTR stem-loop mutation, is essential for translation initiation and affects UV resistance in yeast. Genes Dev 6:2463-77

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