Mitochondria generate the bulk of cellular energy through electron transport and oxidative phosphorylation. They are semiautonomous organelles in that they contain their own DNA genomes (mtDNA), which are replicated, transcribed and translationally expressed within the mitochondrial matrix. However, the coding capacity of mtDNA is limited to 13 protein subunits of the respiratory complexes, and the rRNAs and tRNAs required for their translation. Thus, the nuclear genome provides nearly all of the constituents needed for mitochondrial functions including the maintenance and expression of mtDNA. This arrangement necessitates the interplay of nuclear and mitochondrial genetic systems in meeting cellular energy demands. Both nuclear and mitochondrial genetic lesions, affecting the energy transducing systems of mitochondria, lead to a wide range of human pathologies including various forms of myopathy, cardiomyopathy and central nervous system defects. The overall goal of this proposal is to investigate nuclear regulatory mechanisms that control respiratory chain expression. The main focus is on utilizing biochemical, molecular and genetic approaches to understand the biological functions of nuclear regulatory proteins that control mitochondrial respiratory function. These include the transcriptional activators NRF-1 and NRF-2 that act on the majority of respiratory genes as well as members of the PGC-1 family of coactivators that have been implicated in mitochondrial biogenesis. Emphasis will be placed on PRC, a newly discovered PGC-1 family coactivator that is induced during cell proliferation and coactivates respiratory gene expression by interacting with NRF-I.
The specific aims are: 1) Identify NRF-1 target genes that are activated by PRC and PGC-1 and characterize the molecular determinants of trans-activation. 2) Determine whether the activity or steady-state levels of PRC are altered by agents and conditions known to affect mitochondrial biogenesis. 3) Define the transcription factor specificity of PRC and compare it to that of other PGC-1 family members (PGC-1, PGC-lbeta/PERC). 4) Define structural motifs in PRC that are required for its function. 5) Assess the biological functions of PRC by manipulating its expression in vivo.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM032525-23
Application #
6916313
Study Section
Medical Biochemistry Study Section (MEDB)
Program Officer
Poodry, Clifton A
Project Start
1983-08-01
Project End
2007-07-31
Budget Start
2005-08-01
Budget End
2006-07-31
Support Year
23
Fiscal Year
2005
Total Cost
$442,434
Indirect Cost
Name
Northwestern University at Chicago
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
005436803
City
Chicago
State
IL
Country
United States
Zip Code
60611
Gleyzer, Natalie; Scarpulla, Richard C (2016) Concerted Action of PGC-1-related Coactivator (PRC) and c-MYC in the Stress Response to Mitochondrial Dysfunction. J Biol Chem 291:25529-25541
Gleyzer, Natalie; Scarpulla, Richard C (2013) Activation of a PGC-1-related coactivator (PRC)-dependent inflammatory stress program linked to apoptosis and premature senescence. J Biol Chem 288:8004-15
Scarpulla, Richard C (2012) Nucleus-encoded regulators of mitochondrial function: integration of respiratory chain expression, nutrient sensing and metabolic stress. Biochim Biophys Acta 1819:1088-97
Scarpulla, Richard C; Vega, Rick B; Kelly, Daniel P (2012) Transcriptional integration of mitochondrial biogenesis. Trends Endocrinol Metab 23:459-66
Gleyzer, Natalie; Scarpulla, Richard C (2011) PGC-1-related coactivator (PRC), a sensor of metabolic stress, orchestrates a redox-sensitive program of inflammatory gene expression. J Biol Chem 286:39715-25
Scarpulla, Richard C (2011) Metabolic control of mitochondrial biogenesis through the PGC-1 family regulatory network. Biochim Biophys Acta 1813:1269-78
Vercauteren, Kristel; Gleyzer, Natalie; Scarpulla, Richard C (2009) Short hairpin RNA-mediated silencing of PRC (PGC-1-related coactivator) results in a severe respiratory chain deficiency associated with the proliferation of aberrant mitochondria. J Biol Chem 284:2307-19
Scarpulla, Richard C (2008) Nuclear control of respiratory chain expression by nuclear respiratory factors and PGC-1-related coactivator. Ann N Y Acad Sci 1147:321-34
Scarpulla, Richard C (2006) Nuclear control of respiratory gene expression in mammalian cells. J Cell Biochem 97:673-83
Vercauteren, Kristel; Pasko, Raymond A; Gleyzer, Natalie et al. (2006) PGC-1-related coactivator: immediate early expression and characterization of a CREB/NRF-1 binding domain associated with cytochrome c promoter occupancy and respiratory growth. Mol Cell Biol 26:7409-19

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