Traffic between the nucleus and cytoplasm must pass through the elaborate and highly regulated nuclear pore complex, which thus serves as a gateway to the genome. Normal traffic includes all signals from the outside world, reworded into a language that evokes nuclear change. Traffic outward includes messages designed to translate this nuclear change into action. A study of disease reveals that viruses, including HIV, influenza, polio, and SV40, have evolved mechanisms to hit right at the heart of the nuclear pore and nuclear transport. Inherited human diseases, such as the Nup98- and Nup214-linked human leukemias, result from disruption of these nucleoporin genes. To understand the ways in which disease and viral infection arise from the subversion of normal nuclear trafficking, one must first understand the mechanism of that trafficking. Recently, our lab identified a specific subunit, the Nup 107-160 subcomplex, which is essential to the structure, function, and assembly of the nuclear pore. In the absence of this subcomplex, nuclei are devoid of nuclear pores. The present grant has four major goals: (1) The first is to gain a full molecular and structural knowledge of the critical Nup107-160 complex. This knowledge will be used to decipher complex interactions within the nuclear pore, so that the first three-dimensional map of the elaborate vertebrate nuclear pore may be built. (2) A second goal is to understand the mechanism of nuclear pore assembly, a key event that must occur each cell cycle. The essential nature of the Nup107-160 complex to NPC assembly gives an excellent starting point for this quest. (3) A third goal is to define how an unexpected player, importin beta, not only regulates NPC assembly, but also controls nuclear membrane fusion and assembly. The targets of importin beta in each of these regulatory roles will be sought. (4) A last goal focuses on determining the function of the Nup107- 160 complex on mitotic kinetochores. Successful completion should provide essential insight into the vital gateway to the nucleus.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM033279-22
Application #
6876731
Study Section
Cell Development and Function Integrated Review Group (CDF)
Program Officer
Shapiro, Bert I
Project Start
1984-04-01
Project End
2008-03-31
Budget Start
2005-04-01
Budget End
2006-03-31
Support Year
22
Fiscal Year
2005
Total Cost
$442,707
Indirect Cost
Name
University of California San Diego
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
804355790
City
La Jolla
State
CA
Country
United States
Zip Code
92093
Tam, Arvin B; Roberts, Lindsay S; Chandra, Vivek et al. (2018) The UPR Activator ATF6 Responds to Proteotoxic and Lipotoxic Stress by Distinct Mechanisms. Dev Cell 46:327-343.e7
Forbes, Douglass J; Travesa, Anna; Nord, Matthew S et al. (2015) Nuclear transport factors: global regulation of mitosis. Curr Opin Cell Biol 35:78-90
Schwartz, Michal; Travesa, Anna; Martell, Steven W et al. (2015) Analysis of the initiation of nuclear pore assembly by ectopically targeting nucleoporins to chromatin. Nucleus 6:40-54
Torres-Machorro, Ana Lilia; Clark, Lauren G; Chang, Christie S et al. (2015) The Set3 Complex Antagonizes the MYST Acetyltransferase Esa1 in the DNA Damage Response. Mol Cell Biol 35:3714-25
Basnet, Harihar; Su, Xue B; Tan, Yuliang et al. (2014) Tyrosine phosphorylation of histone H2A by CK2 regulates transcriptional elongation. Nature 516:267-71
Eustice, Moriah; Pillus, Lorraine (2014) Unexpected function of the glucanosyltransferase Gas1 in the DNA damage response linked to histone H3 acetyltransferases in Saccharomyces cerevisiae. Genetics 196:1029-39
Bernis, Cyril; Forbes, Douglass J (2014) Analysis of nuclear reconstitution, nuclear envelope assembly, and nuclear pore assembly using Xenopus in vitro assays. Methods Cell Biol 122:165-91
Bernis, Cyril; Swift-Taylor, Beth; Nord, Matthew et al. (2014) Transportin acts to regulate mitotic assembly events by target binding rather than Ran sequestration. Mol Biol Cell 25:992-1009
Powers, Maureen A; Forbes, Douglass J (2012) Nuclear transport: beginning to gel? Curr Biol 22:R1006-9
Fichtman, Boris; Ramos, Corinne; Rasala, Beth et al. (2010) Inner/Outer nuclear membrane fusion in nuclear pore assembly: biochemical demonstration and molecular analysis. Mol Biol Cell 21:4197-211

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