Germ cells are responsible for the fertility and perpetuation of species and thus serve a key role in development. We are investigating the mechanisms that preserve the immortality of germ cells and guide their unique developmental program, using a combination of genetics, genomics, and molecular and biochemical approaches in the model system Caenorhabditis elegans. We previously identified four C. elegans MES proteins as being required for germ cell immortality. MES-2, MES-3, and MES-6 constitute the Polycomb Group of chromatin regulators in worms, operate as a complex, and participate in maintaining the X chromosomes in a silenced state throughout most of germline development. MES-4 binds the autosomes and may function to protect them from silencing. The MES system operates at the level of modification of histone tails in chromatin. The MES-2/3/6 complex catalyzes methylation of histone H3 Lys27, which represses gene expression. The goals of this proposal are to: a) elucidate how MES-3 and MES-6 and perhaps an alternative partner to MES-6 influence histone methylation by MES-2, b) test our prediction that MES-4 also functions to methylate histones and identify other proteins that operate with MES-4, c) investigate how MES-4 is targeted specifically to the autosomes, d) identify some of the genes whose expression is regulated by MES-2/3/6 and MES-4, and e) determine how MES- 2/3/6 and MES-4 interface with each other and with the SynMuv class of chromatin regulators. The dynamic regulation of chromatin organization is a crucial level of control of gene expression and development, and misregulation is known to contribute to disease states and cancers. Our studies will make important contributions to understanding control of chromatin states, mechanisms for discriminating between the autosomes and the sex chromosomes, and specific chromatin requirements in germ cells. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM034059-19
Application #
6827575
Study Section
Special Emphasis Panel (ZRG1-SSS-U (04))
Program Officer
Haynes, Susan R
Project Start
1984-09-01
Project End
2008-06-30
Budget Start
2004-07-01
Budget End
2005-06-30
Support Year
19
Fiscal Year
2004
Total Cost
$406,173
Indirect Cost
Name
Indiana University Bloomington
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
006046700
City
Bloomington
State
IN
Country
United States
Zip Code
47401
Kaneshiro, Kiyomi R; Strome, Susan (2017) Inheritance of protection from osmotic stress. Nat Cell Biol 19:151-152
Knutson, Andrew Kek?pa'a; Egelhofer, Thea; Rechtsteiner, Andreas et al. (2017) Germ Granules Prevent Accumulation of Somatic Transcripts in the Adult Caenorhabditis elegans Germline. Genetics 206:163-178
Goetsch, Paul D; Garrigues, Jacob M; Strome, Susan (2017) Loss of the Caenorhabditis elegans pocket protein LIN-35 reveals MuvB's innate function as the repressor of DREAM target genes. PLoS Genet 13:e1007088
Marceau, Aimee H; Felthousen, Jessica G; Goetsch, Paul D et al. (2016) Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters. Nat Commun 7:12301
Ahn, Jeong H; Rechsteiner, Andreas; Strome, Susan et al. (2016) A Conserved Nuclear Cyclophilin Is Required for Both RNA Polymerase II Elongation and Co-transcriptional Splicing in Caenorhabditis elegans. PLoS Genet 12:e1006227
Garrigues, Jacob M; Sidoli, Simone; Garcia, Benjamin A et al. (2015) Defining heterochromatin in C. elegans through genome-wide analysis of the heterochromatin protein 1 homolog HPL-2. Genome Res 25:76-88
Strome, Susan; Updike, Dustin (2015) Specifying and protecting germ cell fate. Nat Rev Mol Cell Biol 16:406-16
Rahman, Mohammad M; Munzig, Mandy; Kaneshiro, Kiyomi et al. (2015) Caenorhabditis elegans polo-like kinase PLK-1 is required for merging parental genomes into a single nucleus. Mol Biol Cell 26:4718-35
Latorre, Isabel; Chesney, Michael A; Garrigues, Jacob M et al. (2015) The DREAM complex promotes gene body H2A.Z for target repression. Genes Dev 29:495-500
Gaydos, Laura J; Wang, Wenchao; Strome, Susan (2014) Gene repression. H3K27me and PRC2 transmit a memory of repression across generations and during development. Science 345:1515-8

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