The overall objective of the proposed research is to make the power of anomalous-scattering methods effective in the full range of biological crystallography. The plan builds on accomplishments of this project and worldwide experience, showing that multiwavelength anomalous diffraction (MAD) is now the mainstay of de novo structure determination. We propose to explore the optimization of MAD and SAD, (MAD's single-wavelength counterpart), for applications ranging from structural genomics to membrane proteins and macromolecular assemblages and on to lead discovery for drug development. Realization of the full potential requires further development in instrumentation, in computational and experimental procedures, and in biochemistry. Our anomalous-diffraction experiments will be conducted primarily at synchrotron beamlines that we have constructed at Brookhaven National Laboratory. The overall objective is embodied in four specific aims: (1) We propose to enhance the theoretical and computational tools for analyzing anomalous-diffraction experiments. (2) We propose to develop improved and more conveniently accessible instrumentation and more effective experimental procedures for measuring anomalous diffraction. (3) We propose to develop alternative means for introducing anomalous-scattering centers into macromolecules and to characterize the resonant features associated with these labels. (4) We propose to advance the development of phase evaluation from anomalous-scattering measurements through MAD and SAD applications to challenging problems of biological and medical significance. Biologically exciting problems motivate the development of appropriate tools, and forefront methods to accelerate the solution of interesting structures. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM034102-22
Application #
6986704
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Program Officer
Flicker, Paula F
Project Start
1984-04-01
Project End
2008-11-30
Budget Start
2005-12-01
Budget End
2006-11-30
Support Year
22
Fiscal Year
2006
Total Cost
$337,081
Indirect Cost
Name
Columbia University (N.Y.)
Department
Biochemistry
Type
Schools of Medicine
DUNS #
621889815
City
New York
State
NY
Country
United States
Zip Code
10032
Liu, Qun; Hendrickson, Wayne A (2017) Contemporary Use of Anomalous Diffraction in Biomolecular Structure Analysis. Methods Mol Biol 1607:377-399
Hendrickson, Wayne A (2014) Anomalous diffraction in crystallographic phase evaluation. Q Rev Biophys 47:49-93
Zhang, Zhen; Liu, Qun; Hendrickson, Wayne A (2014) Crystal structures of apparent saccharide sensors from histidine kinase receptors prevalent in a human gut symbiont. FEBS J 281:4263-79
Liu, Qun; Liu, Qinglian; Hendrickson, Wayne A (2013) Robust structural analysis of native biological macromolecules from multi-crystal anomalous diffraction data. Acta Crystallogr D Biol Crystallogr 69:1314-32
Hendrickson, Wayne A (2013) Evolution of diffraction methods for solving crystal structures. Acta Crystallogr A 69:51-9
Liu, Qun; Dahmane, Tassadite; Zhang, Zhen et al. (2012) Structures from anomalous diffraction of native biological macromolecules. Science 336:1033-7
Moore, Jason O; Hendrickson, Wayne A (2012) An asymmetry-to-symmetry switch in signal transmission by the histidine kinase receptor for TMAO. Structure 20:729-41
Collins, Mark N; Hendrickson, Wayne A (2011) Structural characterization of the Boca/Mesd maturation factors for LDL-receptor-type ? propeller domains. Structure 19:324-36
Liu, Qun; Zhang, Zhen; Hendrickson, Wayne A (2011) Multi-crystal anomalous diffraction for low-resolution macromolecular phasing. Acta Crystallogr D Biol Crystallogr 67:45-59
Martinez-Hackert, Erik; Hendrickson, Wayne A (2011) Structural analysis of protein folding by the long-chain archaeal chaperone FKBP26. J Mol Biol 407:450-64

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