The goal of this proposal is to determine how the biosynthesis of the essential coenzyme, pyridoxal phosphate (PALP), is regulated and integrated into cellular metabolism. PALP is the coenzyme for scores of enzymes that participate in all phases of amino acid metabolism and may act as an effector molecule in several metabolic pathways unrelated to amino acid metabolism. Because of these diverse roles, cellular levels of PALP must be carefully regulated in all organisms. Preliminary results in bacteria suggest that regulation of PALP biosynthesis may involve novel mechanisms that sense the availability of certain amino acids. In addition, genetic experiments indicate that the bacterial pdx genes, which encode the PALP biosynthetic enzymes, occur at separate chromosomal locations and that at least one member of this pdx regulon is part of a complex operon. In order to learn more about PALP biosynthesis, recently developed genetic and molecular biological approaches will be applied to a model bacterial system. New classes of pdx mutants will be isolated in E. coli by a variety of selections. These pdx mutations will be mapped, physiologically characterized, and related to the PALP biosynthetic pathway. Transcription and translation fusions, regulatory mutations, and POX kinase mutations will be used along with well-characterized regulatory loci in E. coli to analyze the regulation of PALP biosynthesis at the gene control and pathway levels. Concurrently, the detailed structure and regulation of the pdxA-ksgA locus will be determined using molecular biological techniques and compared to results established previously for the complex pdxB-hisT operon. Besides providing detailed information about PALP biosynthesis, these experiments will address several important questions concerning the regulation of cellular metabolism, including whether there are global controls that link PALP biosynthesis, amino acid metabolism, and phosphate availability, how alternative metabolic pathways are utilized, and how complex regulons are controlled. Results from this basic study of PALP biosynthesis might also help in understanding certain human deficiencies in vitamin B6 metabolism, the interaction between human steroid hormones and PALP-dependent enzymes, and the role of PALP in regulating hypothalamopituitary functions.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM037561-06
Application #
3292921
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Project Start
1990-07-01
Project End
1991-12-16
Budget Start
1990-12-01
Budget End
1991-12-16
Support Year
6
Fiscal Year
1991
Total Cost
Indirect Cost
Name
University of Texas Health Science Center Houston
Department
Type
Schools of Medicine
DUNS #
City
Houston
State
TX
Country
United States
Zip Code
77225
Pease, Andrew J; Roa, Benjamin R; Luo, Wen et al. (2002) Positive growth rate-dependent regulation of the pdxA, ksgA, and pdxB genes of Escherichia coli K-12. J Bacteriol 184:1359-69
Yang, Y; Zhao, G; Man, T K et al. (1998) Involvement of the gapA- and epd (gapB)-encoded dehydrogenases in pyridoxal 5'-phosphate coenzyme biosynthesis in Escherichia coli K-12. J Bacteriol 180:4294-9
Karlinsey, J E; Tsui, H C; Winkler, M E et al. (1998) Flk couples flgM translation to flagellar ring assembly in Salmonella typhimurium. J Bacteriol 180:5384-97
Yang, Y; Tsui, H C; Man, T K et al. (1998) Identification and function of the pdxY gene, which encodes a novel pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate biosynthesis in Escherichia coli K-12. J Bacteriol 180:1814-21
Di Salvo, M; Yang, E; Zhao, G et al. (1998) Expression, purification, and characterization of recombinant Escherichia coli pyridoxine 5'-phosphate oxidase. Protein Expr Purif 13:349-56
Man, T K; Pease, A J; Winkler, M E (1997) Maximization of transcription of the serC (pdxF)-aroA multifunctional operon by antagonistic effects of the cyclic AMP (cAMP) receptor protein-cAMP complex and Lrp global regulators of Escherichia coli K-12. J Bacteriol 179:3458-69
Carroll, P A; Zhao, G; Boyko, S A et al. (1997) Identification, sequencing, and enzymatic activity of the erythrose-4-phosphate dehydrogenase gene of Vibrio cholerae. J Bacteriol 179:293-6
Karlinsey, J E; Pease, A J; Winkler, M E et al. (1997) The flk gene of Salmonella typhimurium couples flagellar P- and L-ring assembly to flagellar morphogenesis. J Bacteriol 179:2389-400
Man, T K; Zhao, G; Winkler, M E (1996) Isolation of a pdxJ point mutation that bypasses the requirement for the PdxH oxidase in pyridoxal 5' -phosphate coenzyme biosynthesis in Escherichia coli K-12. J Bacteriol 178:2445-9
Zhao, G; Winkler, M E (1996) 4-Phospho-hydroxy-L-threonine is an obligatory intermediate in pyridoxal 5'-phosphate coenzyme biosynthesis in Escherichia coli K-12. FEMS Microbiol Lett 135:275-80

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