The long term objective of this proposal is to characterize in detail the structural and functional properties of Zn(II) in biological systems. Zinc is the most common metal found in metalloproteins and is the only metal that is known to be required for every major class of enzyme catalysis. Hundreds of zinc proteins have been isolated and thousands of potential zinc binding sites have been identified in protein sequences. Imbalances in the levels of Zn, or errors in its transport or regulation can have profound health consequence. Despite its importance, there is relatively little information available about biological Zn(II) sites due to the difficulty of studying this spectroscopically """"""""silent"""""""" metal. X-ray absorption spectroscopy, one of the few methods able to provide structural information for non-crystalline materials, will be used to determine their structures. Three major, inter-related objectives are proposed: -X-ray absorption spectroscopy will be used to characterize the Zn binding sites in a series of important proteins, with particular emphasis on a novel class of Zn-alkyl transfer enzymes. -Detailed comparisons will be made of the metal binding sites in a series of structurally defined peptides. The objective of this second set of experiments is to determine the relative importance of metal stereochemical preference and protein structure in defining the structure of a metal binding site. For this work, structures will be compared for a series of spectroscopically silent d10 metal ions (Cu(I), (Ag(I), Cd(II), Hg(II)) and metalloids As(III). -X-ray absorption spectroscopy, x-ray microprobe imaging, microprobe spectroscopy, and x-ray microtomography will be used to characterize the role(s) of Zn in embryo development in zebra fish and Xenopus laevis. Spatially and temporally-resolved spectroscopy will be used to determine the Zn speciation in developing embryos. Coupled capillary-electrophoresis/x-ray fluorescence will be used to resolve and characterize Zn containing proteins.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM038047-13A1
Application #
6262610
Study Section
Metallobiochemistry Study Section (BMT)
Program Officer
Preusch, Peter C
Project Start
1987-04-01
Project End
2004-11-30
Budget Start
2000-12-18
Budget End
2001-11-30
Support Year
13
Fiscal Year
2001
Total Cost
$232,511
Indirect Cost
Name
University of Michigan Ann Arbor
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
791277940
City
Ann Arbor
State
MI
Country
United States
Zip Code
48109
Ruckthong, Leela; Deb, Aniruddha; Hemmingsen, Lars et al. (2018) Incorporation of second coordination sphere D-amino acids alters Cd(II) geometries in designed thiolate-rich proteins. J Biol Inorg Chem 23:123-135
Cabral, Augusto C S; Jakovleska, Jovana; Deb, Aniruddha et al. (2018) Further insights into the metal ion binding abilities and the metalation pathway of a plant metallothionein from Musa acuminata. J Biol Inorg Chem 23:91-107
Marvin, Rebecca G; Wolford, Janet L; Kidd, Matthew J et al. (2012) Fluxes in ""free"" and total zinc are essential for progression of intraerythrocytic stages of Plasmodium falciparum. Chem Biol 19:731-41
Hernick, Marcy; Gattis, Samuel G; Penner-Hahn, James E et al. (2010) Activation of Escherichia coli UDP-3-O-[(R)-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase by Fe2+ yields a more efficient enzyme with altered ligand affinity. Biochemistry 49:2246-55
Alvarez, Hamsell M; Xue, Yi; Robinson, Chandler D et al. (2010) Tetrathiomolybdate inhibits copper trafficking proteins through metal cluster formation. Science 327:331-4
Koutmou, Kristin S; Casiano-Negroni, Anette; Getz, Melissa M et al. (2010) NMR and XAS reveal an inner-sphere metal binding site in the P4 helix of the metallo-ribozyme ribonuclease P. Proc Natl Acad Sci U S A 107:2479-84
Stasser, Jay; Namuswe, Frances; Kasper, Gary D et al. (2010) X-ray absorption spectroscopy and reactivity of thiolate-ligated Fe(III)-OOR complexes. Inorg Chem 49:9178-90
Naranuntarat, Amornrat; Jensen, Laran T; Pazicni, Samuel et al. (2009) The interaction of mitochondrial iron with manganese superoxide dismutase. J Biol Chem 284:22633-40
Chen, Haimei; Pazicni, Samuel; Krett, Nancy L et al. (2009) Coencapsulation of arsenic- and platinum-based drugs for targeted cancer treatment. Angew Chem Int Ed Engl 48:9295-9
Singh, Sangita; Madzelan, Peter; Stasser, Jay et al. (2009) Modulation of the heme electronic structure and cystathionine beta-synthase activity by second coordination sphere ligands: The role of heme ligand switching in redox regulation. J Inorg Biochem 103:689-97

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