The specific aims of the proposed research are to characterize the structural, vibronic, and electronic properties of the functionally important cofactors in reaction center (RC) proteins. The principal investigative tool is resonance Raman (RR) spectroscopy. The first major objective is to characterize the properties of the bacteriochlorophyll/bacteriopheophytin (BCh1/BPh) in genetically modified bacterial RCs that exhibit unusual electron-transfer properties. The genetic modifications include replacements near the primary electron donor (P), both accessory BChls, and the BPh on the photophysically, active L branch of the protein (which is the primary electron acceptor). The studies focus on three general classes of genetically modified RCs: (1) Mutants in which the hydrogen bonding interactions and/or the electric fields in the vicinity of BCh1L, BCh1M, and BPhL are altered by addition/deletion of amino acid residues near ring V of the BCh1/BPh macrocycle. A particular focus of these studies concerns the effects of placing (potentially) charged residues near the photoactive cofactors. (2) Double (and higher order) mutants which incorporate the replacements characteristic of class 1 into a background in which BPhL is replaced with a BCh1 molecule (beta-type RCs). (3) Mutants in which the histidine axial ligands to the BChls of P are replaced by non-ligating glycine residues (cavity mutants). In all cases the RR studies will be conducted on RCs whose detailed electron-transfer kinetics have been elucidated via time-resolved optical experiments. The second major objective is to conduct RR studies aimed at refining the structure of oxygen- evolving complex in photosystem (PS) II RCs. The particular target of these studies is the manganese cluster, which directly mediates the water-splitting/oxygen-evolution reaction. The focus will be the low-frequency region of the spectrum where manganese-ligand vibrations are expected to occur. Toward this end, RR data will be acquired for PSII in which isotopic labels (2H, 18O, 15N, 37C1-/37C1- ) have been incorporated and/or essential ions such as Ca+2 and C1- have been exchanged (for example, Sr+2 for Ca+2 or Br- for C1-). The long-term objective of the studies on bacterial and PSII RCs is to determine how the physical properties of the cofactors (structure, conformation, electron-density distribution) govern and/or reflect their functional characteristics (electron transfer/charge separation across the biological membrane; water splitting/oxygen evolution).

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM039781-14
Application #
6525600
Study Section
Molecular and Cellular Biophysics Study Section (BBCA)
Program Officer
Flicker, Paula F
Project Start
1988-07-01
Project End
2004-07-31
Budget Start
2002-08-01
Budget End
2003-07-31
Support Year
14
Fiscal Year
2002
Total Cost
$184,375
Indirect Cost
Name
University of California Riverside
Department
Chemistry
Type
Schools of Earth Sciences/Natur
DUNS #
City
Riverside
State
CA
Country
United States
Zip Code
92521
Czarnecki, Kazimierz; Chen, Lei; Diers, James R et al. (2006) Low-frequency resonance Raman studies of the H(M202)G cavity mutant of bacterial photosynthetic reaction centers. Photosynth Res 88:31-41
Pendon, Zeus D; Sullivan, James O; van der Hoef, Ineke et al. (2005) Stereoisomers of carotenoids: spectroscopic properties of locked and unlocked cis-isomers of spheroidene. Photosynth Res 86:5-24
Tracewell, Cara A; Cua, Agnes; Bocian, David F et al. (2005) Resonance Raman spectroscopy of carotenoids in Photosystem II core complexes. Photosynth Res 83:45-52
Chen, Lei; Kirmaier, Christine; Holten, Dewey et al. (2005) Resonance Raman characterization of Rhodobacter capsulatus reaction centers with lysine mutations near the accessory bacteriochlorophylls. Photosynth Res 83:35-43
Cua, Agnes; Vrettos, John S; de Paula, Julio C et al. (2003) Raman spectra and normal coordinate analyses of low-frequency vibrations of oxo-bridged manganese complexes. J Biol Inorg Chem 8:439-51
Tracewell, C A; Cua, A; Stewart, D H et al. (2001) Characterization of carotenoid and chlorophyll photooxidation in photosystem II. Biochemistry 40:193-203
Czarnecki, K; Cua, A; Kirmaier, C et al. (1999) Relationship between altered structure and photochemistry in mutant reaction centers in which bacteriochlorophyll replaces the photoactive bacteriopheophytin. Biospectroscopy 5:346-57
Stewart, D H; Cua, A; Chisholm, D A et al. (1998) Identification of histidine 118 in the D1 polypeptide of photosystem II as the axial ligand to chlorophyll Z. Biochemistry 37:10040-6
Cua, A; Kirmaier, C; Holten, D et al. (1998) Resonance raman characterization of reaction centers with an Asp residue near the photoactive bacteriopheophytin. Biochemistry 37:6394-401
Czarnecki, K; Schenck, C C; Bocian, D F (1997) Resonance Raman characterization of reaction centers in which bacteriochlorophyll replaces the photoactive bacteriopheophytin. Biochemistry 36:14697-704

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