The mitochondrial F1F0 ATP synthase catalyzes synthesis of the vast majority of ATP that is utilized by mammalian cells, in the culmination of an intricate process known as oxidative phosphorylation. It is a multi- subunit, membrane-bound enzyme that is known to function with rotary motion of some of its subunits. Mutations found in several of its subunits are manifested clinically. Close relatives of the mitochondrial enzyme are found in chloroplasts and in the plasma membranes of some bacteria. Many of the recent insights into the structure and function of the ATP synthase have come from studies of the E. coli enzyme. This version of the enzyme contains eight different types of subunits. Mutations found in several of its subunits are manifested clinically. Close relatives of the mitochondrial enzyme are found in several of its subunits are manifested clinically. Close relatives of the mitochondrial enzymes are found in chloroplasts and in the plasma membranes of some bacteria. Many of the recent insight into the structure and function of the ATP synthase have come from studies of the E. coli enzyme. This version of the enzyme contains eight different types of subunits. Alpha, beta, gamma, delta, and epsilon form F1, containing the sites of ATP synthesis. Subunits a, b and c form the membrane sector F0, containing the proton pathway. The movement of protons through F0 is thought to drive the rotation of gamma and epsilon subunits, relative to the alpha and beta subunits, which form the ATP catalytic sites. The studies proposed in this application focus on two of the subunits from the E. coli ATP synthase, epsilon and subunit a.
Four specific aims will be pursued. (A) Putative functional regions of subunit a will be examined. Transmembrane spans will be probed by alanine insertion scanning mutagenesis and conserved residues will be mutated for examining of effects on function. (B) Important structural features of subunit a will be identified. Near- neighbor relationships of transmembrane spans in subunit a will be established, and the putative """"""""half-channels"""""""" will be tested by labeling procedures. (C) Subunit interactions among F0 subunits will be investigated by photoactive crosslinking from Cys residues. (D) Structural issues in the epsilon subunit that relate to function will be examined. This includes the surface of epsilon involved in binding to other subunits in the ATP synthase, and the role of flexibility within the epsilon subunit for function.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM040508-13
Application #
6329697
Study Section
Special Emphasis Panel (ZRG1-MCHA (02))
Program Officer
Ikeda, Richard A
Project Start
1988-07-01
Project End
2003-11-30
Budget Start
2000-12-01
Budget End
2001-11-30
Support Year
13
Fiscal Year
2001
Total Cost
$191,624
Indirect Cost
Name
Southern Methodist University
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
City
Dallas
State
TX
Country
United States
Zip Code
75205
Ishmukhametov, Robert R; DeLeon-Rangel, Jessica; Zhu, Shaotong et al. (2017) Analysis of an N-terminal deletion in subunit a of the Escherichia coli ATP synthase. J Bioenerg Biomembr 49:171-181
DeLeon-Rangel, Jessica; Ishmukhametov, Robert R; Jiang, Warren et al. (2013) Interactions between subunits a and b in the rotary ATP synthase as determined by cross-linking. FEBS Lett 587:892-7
Li, Bo; Vik, Steven B; Tu, Youying (2012) Theaflavins inhibit the ATP synthase and the respiratory chain without increasing superoxide production. J Nutr Biochem 23:953-60
Bae, Leon; Vik, Steven B (2009) A more robust version of the Arginine 210-switched mutant in subunit a of the Escherichia coli ATP synthase. Biochim Biophys Acta 1787:1129-34
Ishmukhametov, Robert R; Pond, J Blake; Al-Huqail, Asma et al. (2008) ATP synthesis without R210 of subunit a in the Escherichia coli ATP synthase. Biochim Biophys Acta 1777:32-8
Ganti, Sangeeta; Vik, Steven B (2007) Chemical modification of mono-cysteine mutants allows a more global look at conformations of the epsilon subunit of the ATP synthase from Escherichia coli. J Bioenerg Biomembr 39:99-107
Galkin, Mikhail A; Ishmukhametov, Robert R; Vik, Steven B (2006) A functionally inactive, cold-stabilized form of the Escherichia coli F1Fo ATP synthase. Biochim Biophys Acta 1757:206-14
Vik, Steven B; Ishmukhametov, Robert R (2005) Structure and function of subunit a of the ATP synthase of Escherichia coli. J Bioenerg Biomembr 37:445-9
Ishmukhametov, Robert R; Galkin, Mikhail A; Vik, Steven B (2005) Ultrafast purification and reconstitution of His-tagged cysteine-less Escherichia coli F1Fo ATP synthase. Biochim Biophys Acta 1706:110-6
DeLeon-Rangel, Jessica; Zhang, Di; Vik, Steven B (2003) The role of transmembrane span 2 in the structure and function of subunit a of the ATP synthase from Escherichia coli. Arch Biochem Biophys 418:55-62

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