The immunoglobulin Kappa locus is transcriptionally controlled by two developmental stage-specific enhancers. In addition to transcription, these enhancers have been implicated in the processes of somatic rearrangement and somatic mutation, necessary for proper B cell development. Therefore, understanding the mechanisms of kappa locus enhancer activity is important. The intron enhancer lies within the intron separating the joining from constant region exons and is largely controlled by the availability of the active form of NF-kappa B. The 3 prime enhancer lies 8.5 kilobases downstream of the constant region and is controlled by the interplay between positive-and negative-acting sequences. We have identified many of the proteins that bind to the 3 prime enhancer to control its activity. The transcription factors PU.1, PIP, E2A, c-fos, c-jun, ATF1, and CREM bind to the central 132 basepair core of the enhancer. These proteins can assemble on enhancer DNA sequences as a higher order complex (the enhanceosome). We have identified some of the protein contacts between the various enhancer binding proteins. Some of these contacts are necessary for enhanceosome formation and for transcriptional activity. In experiments proposed here, we will determine the mechanism of specific protein interactions between various enhancer binding proteins. Specifically, interactions between PU.1, PIP, c-fos, c-jun, ATF1, CREM, and E2A will be characterized. Mutants of the PU.1 protein will be assayed for their ability to physically interact with other enhancer binding proteins. The consequences of mutations that disrupt protein interactions for enhanceosome formation and for enhancer activity will be determined. We will also study various physical properties of the enhanceosome complex. We will also study the role of protein interactions by PU.1 on hematopoietic development. Mice deficient in PU.1 lack B cells, T cells, and myeloid cells. We will insert various Pu.1 mutants with altered abilities to make various protein contacts into embryonic stem (ES) cells deficient in PU.1. The 'corrected' ES cells will be used to prepare chimeric mice and their contribution to various hematopoietic lineages will be determined. Finally, we will study the role of various positive-acting, inducible, and negative-acting enhancer DNA sequences on the developmental control of enhancer activity in transgenic mice. Many of the proteins that bind to the 3 prime enhancer are encoded by proto-oncogenes. Therefore, these studies will also be useful for understanding the roles of these proteins in oncogenesis.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM042415-10
Application #
2900718
Study Section
Molecular Biology Study Section (MBY)
Program Officer
Tompkins, Laurie
Project Start
1989-07-01
Project End
2001-03-31
Budget Start
1999-04-01
Budget End
2000-03-31
Support Year
10
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Pennsylvania
Department
Veterinary Sciences
Type
Schools of Veterinary Medicine
DUNS #
042250712
City
Philadelphia
State
PA
Country
United States
Zip Code
19104
Atchison, Michael L (2014) Function of YY1 in Long-Distance DNA Interactions. Front Immunol 5:45
Hodawadekar, Suchita; Yu, Duonan; Cozma, Diana et al. (2007) B-Lymphoma cells with epigenetic silencing of Pax5 trans-differentiate into macrophages, but not other hematopoietic lineages. Exp Cell Res 313:331-40
Hodawadekar, Suchita; Wei, Fang; Yu, Duonan et al. (2006) Epigenetic histone modifications do not control Igkappa locus contraction and intranuclear localization in cells with dual B cell-macrophage potential. J Immunol 177:6165-71
Wilkinson, Frank H; Park, Kyoungsook; Atchison, Michael L (2006) Polycomb recruitment to DNA in vivo by the YY1 REPO domain. Proc Natl Acad Sci U S A 103:19296-301
McDevit, Daniel C; Perkins, Leslie; Atchison, Michael L et al. (2005) The Ig kappa 3' enhancer is activated by gradients of chromatin accessibility and protein association. J Immunol 174:2834-42
Srinivasan, Lakshmi; Pan, Xuan; Atchison, Michael L (2005) Transient requirements of YY1 expression for PcG transcriptional repression and phenotypic rescue. J Cell Biochem 96:689-99
Bai, Yuchen; Srinivasan, Lakshmi; Perkins, Leslie et al. (2005) Protein acetylation regulates both PU.1 transactivation and Ig kappa 3' enhancer activity. J Immunol 175:5160-9
Joo, Myungsoo; Park, Gye Young; Wright, Jeffrey G et al. (2004) Transcriptional regulation of the cyclooxygenase-2 gene in macrophages by PU.1. J Biol Chem 279:6658-65
Srinivasan, Lakshmi; Atchison, Michael L (2004) YY1 DNA binding and PcG recruitment requires CtBP. Genes Dev 18:2596-601
Nagulapalli, Sujatha; Goheer, Aisha; Pitt, Leslie et al. (2002) Mechanism of e47-Pip interaction on DNA resulting in transcriptional synergy and activation of immunoglobulin germ line sterile transcripts. Mol Cell Biol 22:7337-50

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