We are studying the mechanism of kinesin, a mechanoenzyme that drives microtubule-based intracellular organelle transport processes. Kinesin couples a free-energy-liberating chemical reaction (the hydrolysis of ATP) to a cycle of mechanical steps that moves the enzyme molecules and attached organelles along microtubules. The long-term goals of our research are to: 1) characterize the molecular events that are the fundamental steps in kinesin movement, and 2) determine how these steps are coupled to the reactions of ATP hydrolysis. We have developed a light microscope digital image processing technique for measuring with nanometer-scale precision the movements generated by kinesin molecules. This technique represents an opportunity to directly observe the fundamental processes of mechanoenzyme movement. Microtubule-based intracellular motility plays an essential role in the physiology of eukaryotic cells. Its functions include transport of materials, chromosome and nuclear movements in mitosis/meiosis, and morphogenesis of membranous organelles. Kinesin (or kinesin homologs) are thought to function in all of these categories of cellular processes. The proposed research is an exploration at the molecular level of these functions.
The specific aim of the proposed research is to directly observe and characterize the movement caused by a single catalytic turnover of an individual kinesin molecule. In the proposed experiments, we will: * express and purify a specifically biotinated kinesin fusion protein. Previous studies suggest that this species should be fully mechanochemically functional. We will characterize the functional properties of this recombinant mechanoenzyme to be sure that this is the case. * synthesize a novel enzyme-labelling reagent that consists of 100 nm diameter polystyrene beads each of which contains a single site for the attachment of a biotinated enzyme. * prepare and characterize the 1:1 mechanoenzyme:bead conjugates. The conjugates will then be used to confirm that we can reliably observe movements driven by single mechanoenzyme molecules. We will establish a quantitative motility assay which will measure the specific activity of movement by measuring the fraction of the enzyme-bead conjugates capable of movement. * search for single-turnover movements in the assay by examining the motion of the mechanoenzyme:bead complexes with nanometer-scale precision. These measurements will be conducted under conditions (e.g., limiting ATP) in which discrete """"""""jumps"""""""" corresponding to single-turnover movements should be detected. * characterize the spatial and temporal properties of the observed jumps and determine if they have the characteristics of single-turnover movements.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM043369-02
Application #
3302443
Study Section
Molecular Cytology Study Section (CTY)
Project Start
1991-04-01
Project End
1994-03-31
Budget Start
1992-04-01
Budget End
1993-03-31
Support Year
2
Fiscal Year
1992
Total Cost
Indirect Cost
Name
Brandeis University
Department
Type
Schools of Arts and Sciences
DUNS #
616845814
City
Waltham
State
MA
Country
United States
Zip Code
02454
Tetone, Larry E; Friedman, Larry J; Osborne, Melisa L et al. (2017) Dynamics of GreB-RNA polymerase interaction allow a proofreading accessory protein to patrol for transcription complexes needing rescue. Proc Natl Acad Sci U S A 114:E1081-E1090
Paramanathan, Thayaparan; Reeves, Daniel; Friedman, Larry J et al. (2014) A general mechanism for competitor-induced dissociation of molecular complexes. Nat Commun 5:5207
Anderson, Eric G; Hoskins, Aaron A (2014) Single molecule approaches for studying spliceosome assembly and catalysis. Methods Mol Biol 1126:217-41
Crawford, Daniel J; Hoskins, Aaron A; Friedman, Larry J et al. (2013) Single-molecule colocalization FRET evidence that spliceosome activation precedes stable approach of 5' splice site and branch site. Proc Natl Acad Sci U S A 110:6783-8
Smith, Benjamin A; Daugherty-Clarke, Karen; Goode, Bruce L et al. (2013) Pathway of actin filament branch formation by Arp2/3 complex revealed by single-molecule imaging. Proc Natl Acad Sci U S A 110:1285-90
Shcherbakova, Inna; Hoskins, Aaron A; Friedman, Larry J et al. (2013) Alternative spliceosome assembly pathways revealed by single-molecule fluorescence microscopy. Cell Rep 5:151-65
Smith, Benjamin A; Padrick, Shae B; Doolittle, Lynda K et al. (2013) Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation. Elife 2:e01008
Breitsprecher, Dennis; Jaiswal, Richa; Bombardier, Jeffrey P et al. (2012) Rocket launcher mechanism of collaborative actin assembly defined by single-molecule imaging. Science 336:1164-8
Garcia, Hernan G; Sanchez, Alvaro; Boedicker, James Q et al. (2012) Operator sequence alters gene expression independently of transcription factor occupancy in bacteria. Cell Rep 2:150-61
Friedman, Larry J; Gelles, Jeff (2012) Mechanism of transcription initiation at an activator-dependent promoter defined by single-molecule observation. Cell 148:679-89

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