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Ferreiro, Diego U; Komives, Elizabeth A; Wolynes, Peter G (2018) Frustration, function and folding. Curr Opin Struct Biol 48:68-73
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Chen, Mingchen; Schafer, Nicholas P; Zheng, Weihua et al. (2018) The Associative Memory, Water Mediated, Structure and Energy Model (AWSEM)-Amylometer: Predicting Amyloid Propensity and Fibril Topology Using an Optimized Folding Landscape Model. ACS Chem Neurosci 9:1027-1039
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Lu, Wei; Schafer, Nicholas P; Wolynes, Peter G (2018) Energy landscape underlying spontaneous insertion and folding of an alpha-helical transmembrane protein into a bilayer. Nat Commun 9:4949
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Chen, Mingchen; Lin, Xingcheng; Lu, Wei et al. (2017) Protein Folding and Structure Prediction from the Ground Up II: AAWSEM for ?/? Proteins. J Phys Chem B 121:3473-3482
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Zheng, Weihua; Tsai, Min-Yeh; Wolynes, Peter G (2017) Comparing the Aggregation Free Energy Landscapes of Amyloid Beta(1-42) and Amyloid Beta(1-40). J Am Chem Soc 139:16666-16676
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Sirovetz, Brian J; Schafer, Nicholas P; Wolynes, Peter G (2017) Protein structure prediction: making AWSEM AWSEM-ER by adding evolutionary restraints. Proteins 85:2127-2142
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Chen, Mingchen; Wolynes, Peter G (2017) Aggregation landscapes of Huntingtin exon 1 protein fragments and the critical repeat length for the onset of Huntington's disease. Proc Natl Acad Sci U S A 114:4406-4411
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Chen, Mingchen; Tsai, MinYeh; Zheng, Weihua et al. (2016) The Aggregation Free Energy Landscapes of Polyglutamine Repeats. J Am Chem Soc 138:15197-15203
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Zheng, Weihua; Tsai, Min-Yeh; Chen, Mingchen et al. (2016) Exploring the aggregation free energy landscape of the amyloid-? protein (1-40). Proc Natl Acad Sci U S A 113:11835-11840
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Schafer, Nicholas P; Truong, Ha H; Otzen, Daniel E et al. (2016) Topological constraints and modular structure in the folding and functional motions of GlpG, an intramembrane protease. Proc Natl Acad Sci U S A 113:2098-103
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