The human genome is composed of approximately 4x10/9 base pairs of DNA. In order to grow, a human cell must precisely duplicate this entire genome during each cell cycle. This requires the concerted action of many proteins to initiate DNA replication specifically to multiple origins and to synthesize large amounts of DNA accurately. The goal of this research is to elucidate the molecular mechanism(s) of eukaryotic DNA replication and how DNA replication is regulated in the cell. This research focuses on Replication Protein A (RPA), a multi-subunit protein that binds to single-stranded. This human protein is absolutely required for DNA replication, DNA repair and recombination. In addition to binding to single-stranded DNA, RPA interacts with regulation (e.g. p53). These interactions appear to be required for RPA function. RPA also become phosphorylated appears to regulated RPA-protein interactions. The goal of these studies is to elucidate the role of RPA in DNA replication and other reactions of cellular metabolism. A combination of mutational analyses, direct biochemical assays, replication assays and genetic analysis will be used to: (1) define the molecular interactions of RNA with DNA, (2) elucidate the roles of RNA in DNA replication and determine the role(s) of RPA in cellular coordination of DNA metabolism and (3) determine the structure of RPA and characterize conformation changes in RPA. These studies will lead to a better understanding of the molecular mechanism of DNA replication and cellular DNA metabolism.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM044721-10
Application #
2902592
Study Section
Biochemistry Study Section (BIO)
Project Start
1990-07-01
Project End
2003-06-30
Budget Start
1999-07-01
Budget End
2000-06-30
Support Year
10
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Iowa
Department
Biochemistry
Type
Schools of Medicine
DUNS #
041294109
City
Iowa City
State
IA
Country
United States
Zip Code
52242
Chen, Ran; Subramanyam, Shyamal; Elcock, Adrian H et al. (2016) Dynamic binding of replication protein a is required for DNA repair. Nucleic Acids Res 44:5758-72
Nguyen, Binh; Sokoloski, Joshua; Galletto, Roberto et al. (2014) Diffusion of human replication protein A along single-stranded DNA. J Mol Biol 426:3246-3261
Sparks, Justin L; Kumar, Rakesh; Singh, Mayank et al. (2012) Human exonuclease 5 is a novel sliding exonuclease required for genome stability. J Biol Chem 287:42773-83
Lindsey-Boltz, Laura A; Reardon, Joyce T; Wold, Marc S et al. (2012) In vitro analysis of the role of replication protein A (RPA) and RPA phosphorylation in ATR-mediated checkpoint signaling. J Biol Chem 287:36123-31
Hass, Cathy S; Lam, Koonyee; Wold, Marc S (2012) Repair-specific functions of replication protein A. J Biol Chem 287:3908-18
Hass, Cathy S; Chen, Ran; Wold, Marc S (2012) Detection of posttranslational modifications of replication protein A. Methods Mol Biol 922:193-204
Hass, Cathy S; Gakhar, Lokesh; Wold, Marc S (2010) Functional characterization of a cancer causing mutation in human replication protein A. Mol Cancer Res 8:1017-26
Mason, Aaron C; Roy, Rupa; Simmons, Daniel T et al. (2010) Functions of alternative replication protein A in initiation and elongation. Biochemistry 49:5919-28
Kemp, Michael G; Mason, Aaron C; Carreira, Aura et al. (2010) An alternative form of replication protein a expressed in normal human tissues supports DNA repair. J Biol Chem 285:4788-97
Haring, Stuart J; Humphreys, Troy D; Wold, Marc S (2010) A naturally occurring human RPA subunit homolog does not support DNA replication or cell-cycle progression. Nucleic Acids Res 38:846-58

Showing the most recent 10 out of 45 publications