The broad and long range objective of the proposed research is to understand the extent to which adaptive response of enzymes in a metabolic pathway is related to pathway position, and the extent to which evidence for natural selection at individual loci can be coupled to simple responses in selection on life-history associated metabolic energy storage pools. Using Drosophila as a model system we will identify those pathway steps involved in glycolysis and the Krebs cycle which are responding to natural selection and thereby, in theory, identify those steps that possess the potential to modulate flux through glycolysis and its branch points. Specifically this will involve collection of population data on Drosophila melanogaster, D. simulans and a single sequence for D. Yakuba, for DNA sequence variation at eight genes involved in the glycolytic and Krebs cycle.
A second aim will determine if the amino acid polymorphism uncovered in the active site of triose phosphate isomerase in Drosophila melanogaster affects the in vitro function of the enzyme.
A third aim i s to determine the extent to which amino acid polymorphisms and divergence at four enzymes will be connected with known 3D structures and domains of established functional significance. Fourth, the extent to which latitudinal clines exist for metabolic pools and amino acid polymorphisms at pathway points will be examined in North America. Finally, the potential of individual pathway steps, when depressed in activity, to modulate flux and hence affect metabolic pool levels will be assessed.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM045247-04
Application #
2404338
Study Section
Genetics Study Section (GEN)
Project Start
1991-08-01
Project End
2001-06-30
Budget Start
1997-07-01
Budget End
1998-06-30
Support Year
4
Fiscal Year
1997
Total Cost
Indirect Cost
Name
State University New York Stony Brook
Department
Biology
Type
Schools of Arts and Sciences
DUNS #
804878247
City
Stony Brook
State
NY
Country
United States
Zip Code
11794
Eanes, Walter F (2011) Molecular population genetics and selection in the glycolytic pathway. J Exp Biol 214:165-71
Merritt, Thomas J S; Kuczynski, Caitlin; Sezgin, Efe et al. (2009) Quantifying interactions within the NADP(H) enzyme network in Drosophila melanogaster. Genetics 182:565-74
Eanes, Walter F; Merritt, Thomas J S; Flowers, Jonathan M et al. (2009) Direct evidence that genetic variation in glycerol-3-phosphate and malate dehydrogenase genes (Gpdh and Mdh1) affects adult ethanol tolerance in Drosophila melanogaster. Genetics 181:607-14
Marks, Jessica A; Biermann, Christiane H; Eanes, Walter F et al. (2008) Sperm polymorphism within the sea urchin Strongylocentrotus droebachiensis: divergence between Pacific and Atlantic oceans. Biol Bull 215:115-25
Flowers, J M; Sezgin, E; Kumagai, S et al. (2007) Adaptive evolution of metabolic pathways in Drosophila. Mol Biol Evol 24:1347-54
Merritt, Thomas J S; Sezgin, Efe; Zhu, Chen-Tseh et al. (2006) Triglyceride pools, flight and activity variation at the Gpdh locus in Drosophila melanogaster. Genetics 172:293-304
Eanes, Walter F; Merritt, Thomas J S; Flowers, Jonathan M et al. (2006) Flux control and excess capacity in the enzymes of glycolysis and their relationship to flight metabolism in Drosophila melanogaster. Proc Natl Acad Sci U S A 103:19413-8
Matzkin, Luciano M; Merritt, Thomas J S; Zhu, Chen-Tseh et al. (2005) The structure and population genetics of the breakpoints associated with the cosmopolitan chromosomal inversion In(3R)Payne in Drosophila melanogaster. Genetics 170:1143-52
Merritt, Thomas J S; Duvernell, David; Eanes, Walter F (2005) Natural and synthetic alleles provide complementary insights into the nature of selection acting on the Men polymorphism of Drosophila melanogaster. Genetics 171:1707-18
Schmidt, Paul S; Matzkin, Luciano; Ippolito, Michael et al. (2005) Geographic variation in diapause incidence, life-history traits, and climatic adaptation in Drosophila melanogaster. Evolution 59:1721-32

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