X inactivation, established during early mammalian development, results in the silencing of all but one X chromosome in cells of female embryos. However, genes that escape inactivation are interspersed on the X chromosome. The unusual expression of some of these genes may explain the association of Turner syndrome with the lack of one X chromosome. Our previous studies have uncovered major differences between human and mouse in terms of location and X-inactivation status of genes. This proposal exploits mouse systems to follow the timing of X inactivation and escape during development, to determine the X-inactivation status of genes in relation to their location and to examine evolution of dosage compensation. Specifically, we plan (l) to construct transgenic mice that contain reporter sequences inserted in the Hprt gene that is subject to X inactivation and the Smcx gene that escapes. Expression of the reporter sequences will be followed during development. We will also continue studies of a transgene that escapes X inactivation. Second, we plan (2) to construct transgenic mice with reporter sequences inserted at different locations from the inactivation center to follow spreading of X inactivation. A parallel approach will be to assay for allele-specific expression of X-linked genes by in situ hybridization. Third, we plan (3) to define the extent of a rearrangement previously detected by mapping of the Clcn4 gene to the X chromosome in one mouse species but to an autosome in another. Expression studies of Clcn4 will be done to determine the consequences of dosage compensation. Finally we plan (4) to determine the X-inactivation status of mouse genes using an X-autosome translocation system developed previously. This study in conjunction with detailed mapping will show whether genes that escape X inactivation are located in specific domains. The experiments planned based on expression and mapping studies of genes that escape X inactivation in comparison to those subject to inactivation, should further elucidate the processes of X-inactivation spreading and maintenance and of evolution of the sex chromosomes.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM046883-08
Application #
6018874
Study Section
Mammalian Genetics Study Section (MGN)
Project Start
1992-08-01
Project End
2000-07-31
Budget Start
1999-08-01
Budget End
2000-07-31
Support Year
8
Fiscal Year
1999
Total Cost
Indirect Cost
Name
University of Washington
Department
Pathology
Type
Schools of Medicine
DUNS #
135646524
City
Seattle
State
WA
Country
United States
Zip Code
98195
Arnold, Arthur P; Disteche, Christine M (2018) Sexual Inequality in the Cancer Cell. Cancer Res 78:5504-5505
Cusanovich, Darren A; Hill, Andrew J; Aghamirzaie, Delasa et al. (2018) A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility. Cell 174:1309-1324.e18
Dinarello, Charles Anthony (2018) An Interleukin-1 Signature in Breast Cancer Treated with Interleukin-1 Receptor Blockade: Implications for Treating Cytokine Release Syndrome of Checkpoint Inhibitors. Cancer Res 78:5200-5202
Ma, Wenxiu; Bonora, Giancarlo; Berletch, Joel B et al. (2018) X-Chromosome Inactivation and Escape from X Inactivation in Mouse. Methods Mol Biol 1861:205-219
Bonora, G; Deng, X; Fang, H et al. (2018) Orientation-dependent Dxz4 contacts shape the 3D structure of the inactive X chromosome. Nat Commun 9:1445
Bonora, Giancarlo; Disteche, Christine M (2017) Structural aspects of the inactive X chromosome. Philos Trans R Soc Lond B Biol Sci 372:
Keown, Christopher L; Berletch, Joel B; Castanon, Rosa et al. (2017) Allele-specific non-CG DNA methylation marks domains of active chromatin in female mouse brain. Proc Natl Acad Sci U S A 114:E2882-E2890
Wei, Gengze; Deng, Xinxian; Agarwal, Saurabh et al. (2016) Patient Mutations of the Intellectual Disability Gene KDM5C Downregulate Netrin G2 and Suppress Neurite Growth in Neuro2a Cells. J Mol Neurosci 60:33-45
Disteche, Christine M (2016) Dosage compensation of the sex chromosomes and autosomes. Semin Cell Dev Biol 56:9-18
Berletch, Joel B; Ma, Wenxiu; Yang, Fan et al. (2015) Identification of genes escaping X inactivation by allelic expression analysis in a novel hybrid mouse model. Data Brief 5:761-9

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