Protein folding and assembly are central biological processes that must occur correctly for the proper functioning of all living cells. Many devastating human diseases, including neurodegenerative Alzheimer and prion diseases, are the consequence of disarrayed protein folding and assembly. A relatively large amount of cellular activity is dedicated to ensure the correct folding and assembly of proteins. In the event of misfolding, proteins are driven to aggregation and degradation pathways. Degradation of misfolded proteins is crucial because they may form toxic aggregates, which can interfere with normal cellular functions. Assembly factors that minimize aggregation (chaperones and foldases) or remove aggregates (proteases) are therefore complementary cellular activities that are regulated in response to the protein-folding status of the cell. ? ? Studying the assembly of membrane proteins has been a challenging task owing to their complex folding behavior. However, a recent explosion in the structural resolution of many membrane proteins, including those included in this study, has given a renewed impetus to the field of membrane protein biogenesis. The proposed research is directed at understanding the assembly of a unique OMP of E. coli, TolC, which folds into a novel three-dimensional structure. The TolC protein carries out several medically and physiologically important functions, including antibiotic efflux and toxin secretion. This research will identify and characterize intragenic and extragenic factors that contribute to TolC's assembly into trimeric barrels composed of alpha-helices and beta-strands. These aspects will be studied through exploiting genetic, molecular, and biochemical methods. The available data show that TolC follows an assembly pathway distinct from all other OMPs studied so far, thus providing an opportunity to uncover novel principles governing OMP targeting and assembly. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM048167-11
Application #
6740886
Study Section
Microbial Physiology and Genetics Subcommittee 2 (MBC)
Program Officer
Shapiro, Bert I
Project Start
1992-08-01
Project End
2007-04-30
Budget Start
2004-05-01
Budget End
2005-04-30
Support Year
11
Fiscal Year
2004
Total Cost
$224,250
Indirect Cost
Name
Arizona State University-Tempe Campus
Department
Microbiology/Immun/Virology
Type
Schools of Arts and Sciences
DUNS #
943360412
City
Tempe
State
AZ
Country
United States
Zip Code
85287
Misra, Rajeev; Stikeleather, Ryan; Gabriele, Rebecca (2015) In vivo roles of BamA, BamB and BamD in the biogenesis of BamA, a core protein of the ?-barrel assembly machine of Escherichia coli. J Mol Biol 427:1061-74
Leonard-Rivera, Margaret; Misra, Rajeev (2012) Conserved residues of the putative L6 loop of Escherichia coli BamA play a critical role in the assembly of ýý-barrel outer membrane proteins, including that of BamA itself. J Bacteriol 194:4662-8
Tellez Jr, Rene; Misra, Rajeev (2012) Substitutions in the BamA ?-barrel domain overcome the conditional lethal phenotype of a ?bamB ?bamE strain of Escherichia coli. J Bacteriol 194:317-24
Workman, Patricia; Heide, Kristina; Giuliano, Nicolas et al. (2012) Genetic, biochemical, and molecular characterization of the polypeptide transport-associated domain of Escherichia coli BamA. J Bacteriol 194:3512-21
Leiser, Owen P; Charlson, Emily S; Gerken, Henri et al. (2012) Reversal of the ?degP phenotypes by a novel rpoE allele of Escherichia coli. PLoS One 7:e33979
Bennion, Drew; Charlson, Emily S; Coon, Eric et al. (2010) Dissection of ýý-barrel outer membrane protein assembly pathways through characterizing BamA POTRA 1 mutants of Escherichia coli. Mol Microbiol 77:1153-71
Gerken, Henri; Misra, Rajeev (2010) MzrA-EnvZ interactions in the periplasm influence the EnvZ/OmpR two-component regulon. J Bacteriol 192:6271-8
Gerken, Henri; Leiser, Owen P; Bennion, Drew et al. (2010) Involvement and Necessity of the Cpx Regulon in the Event of Aberrant beta-barrel Outer Membrane Protein Assembly. Mol Microbiol :
Gerken, Henri; Charlson, Emily S; Cicirelli, Elisha M et al. (2009) MzrA: a novel modulator of the EnvZ/OmpR two-component regulon. Mol Microbiol 72:1408-22
Masi, Muriel; Duret, Guillaume; Delcour, Anne H et al. (2009) Folding and trimerization of signal sequence-less mature TolC in the cytoplasm of Escherichia coli. Microbiology 155:1847-57

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