The assembly of proteins is a universal biological process whose fundamental principles and machineries are conserved from bacteria to human. In the case of aberrant protein assembly, a cellular stress response is activated which, on one hand, elevates the expression of genes whose products assist in protein folding, assembly and degradation, and on the other, lowers protein synthesis to reduce the burden on the assembly machinery. Defects in these two highly conserved complementary responses can have broad consequences ranging from human diseases to loss of bacterial viability and virulence. This research investigates the assembly of ?-barrel outer membrane proteins (OMPs) in Escherichia coli. OMP assembly proceeds in two distinct phases, the first of which occurs in the soluble environment of the periplasm where nascent polypeptides attain folding status required for the second phase that occurs in the outer membrane where the final assembly and membrane insertion are achieved. More specifically, the proposed research will examine the role of YfgL, a lipoprotein component of the recently discovered OMP assembly machinery. The absence of YfgL confers pleiotropic phenotypes, including a significant delay in ?-barrel OMP assembly kinetics, conditional lethality in a background devoid of the major periplasmic protease DegP, drug hypersensitivity, and reduced virulence in E. coli and Salmonella typhimurium. Together, these phenotypes of YfgL mutants reflect broad and significant roles for YfgL in bacterial physiology and pathogenesis. The role of a novel protein, YqjB, in reducing envelope stress will also be examined. It is hypothesized that elevated YqjB levels under envelope stress conditions modulate the EnvZ/OmpR two-component regulatory system to reduce OMP synthesis, thereby relieving envelope stress. The two aims of this proposal are directed at gaining a deeper understanding of the mechanism by which the soluble OMP assembly events are coordinated with those that occur in the outer membrane and how the interconnected regulatory network help reduce envelope stress by down-regulating OMP synthesis.

Public Health Relevance

The assembly of proteins is a universal biological process whose fundamental principles and machineries are conserved from bacteria to human. In the case of aberrant protein assembly, a cellular stress response is activated which, on one hand, elevates the expression of genes whose products assist in protein folding, assembly and degradation, and on the other, lowers protein synthesis to reduce the burden on the assembly machinery. Defects in these two highly conserved complementary responses can have broad consequences ranging from human diseases to loss of bacterial viability and virulence.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM048167-17
Application #
8077957
Study Section
Special Emphasis Panel (ZRG1-IDM-A (02))
Program Officer
Ainsztein, Alexandra M
Project Start
1992-08-01
Project End
2013-05-31
Budget Start
2011-06-01
Budget End
2013-05-31
Support Year
17
Fiscal Year
2011
Total Cost
$316,310
Indirect Cost
Name
Arizona State University-Tempe Campus
Department
Other Basic Sciences
Type
Schools of Arts and Sciences
DUNS #
943360412
City
Tempe
State
AZ
Country
United States
Zip Code
85287
Misra, Rajeev; Stikeleather, Ryan; Gabriele, Rebecca (2015) In vivo roles of BamA, BamB and BamD in the biogenesis of BamA, a core protein of the ?-barrel assembly machine of Escherichia coli. J Mol Biol 427:1061-74
Workman, Patricia; Heide, Kristina; Giuliano, Nicolas et al. (2012) Genetic, biochemical, and molecular characterization of the polypeptide transport-associated domain of Escherichia coli BamA. J Bacteriol 194:3512-21
Leiser, Owen P; Charlson, Emily S; Gerken, Henri et al. (2012) Reversal of the ?degP phenotypes by a novel rpoE allele of Escherichia coli. PLoS One 7:e33979
Leonard-Rivera, Margaret; Misra, Rajeev (2012) Conserved residues of the putative L6 loop of Escherichia coli BamA play a critical role in the assembly of ýý-barrel outer membrane proteins, including that of BamA itself. J Bacteriol 194:4662-8
Tellez Jr, Rene; Misra, Rajeev (2012) Substitutions in the BamA ?-barrel domain overcome the conditional lethal phenotype of a ?bamB ?bamE strain of Escherichia coli. J Bacteriol 194:317-24
Bennion, Drew; Charlson, Emily S; Coon, Eric et al. (2010) Dissection of ýý-barrel outer membrane protein assembly pathways through characterizing BamA POTRA 1 mutants of Escherichia coli. Mol Microbiol 77:1153-71
Gerken, Henri; Misra, Rajeev (2010) MzrA-EnvZ interactions in the periplasm influence the EnvZ/OmpR two-component regulon. J Bacteriol 192:6271-8
Gerken, Henri; Leiser, Owen P; Bennion, Drew et al. (2010) Involvement and Necessity of the Cpx Regulon in the Event of Aberrant beta-barrel Outer Membrane Protein Assembly. Mol Microbiol :
Gerken, Henri; Charlson, Emily S; Cicirelli, Elisha M et al. (2009) MzrA: a novel modulator of the EnvZ/OmpR two-component regulon. Mol Microbiol 72:1408-22
Masi, Muriel; Duret, Guillaume; Delcour, Anne H et al. (2009) Folding and trimerization of signal sequence-less mature TolC in the cytoplasm of Escherichia coli. Microbiology 155:1847-57

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