The aim of this research is to understand how stable states of gene expression are maintained during development. Molecular, genetic and biochemical methods will be used to study proteins that control transcription of homeotic genes in Drosophila melanogaster. Homeotic genes determine the identities of segments in the fly. Selective expression of homeotic genes is needed throughout fly development. Segmentation gene products control the initial patterns of homeotic gene expression in 2- hour-old embryos, but they decay by about 4 hours. The Polycomb group (PcG) proteins are transcriptional repressors that then maintain homeotic expression patterns during the rest of development. Current models suggest that PcG proteins recognize the initial off states of homeotic genes established in early embryos and they maintain repression through stable association and action of protein complexes in the local chromatin. This research will investigate molecular roles of PcG protein complexes and their individual components. Two major types of PcG complexes have been identified; one contains the PcG proteins extra sex combs (ESC) and Enhancer of zeste [E(Z)] and the other contains Polycomb (PC), polyhomeotic (PH), Posterior sex combs (PSC) and Sex comb on midleg (SCM). The experiments described in this proposal will seek to define molecular activities and components of the ESC-E(Z) complex and the molecular function of SCM with respect to the other major PcG complex.
These aims will be approached using a combination of protein purification and characterization, site-directed and random mutagenesis, expression and manipulation of transgenes, protein interaction tests, and immunostaining of chromosomes. Additional studies will investigate in vivo interactions between the two types of PcG complexes. Every PcG repressor so far cloned from Drosophila has homologs in mammals. These are functional homologs since knockout mutations in these genes produce homeotic defects in mouse embryos that resemble the developmental defects in the corresponding fly mutants. Thus, an understanding of PcG mechanisms of repression in flies should provide clues about similar developmental controls in higher organisms. PcG repressors have also been implicated in lymphomagenesis in mice, in abnormal cell proliferation in tissue culture cells, and in normal processes of hematopoiesis. Knowledge about the fly PcG components and mechanisms may contribute to a better understanding of normal blood cell development and processes that underlie certain human cancers.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM049850-07
Application #
6525696
Study Section
Genetics Study Section (GEN)
Program Officer
Carter, Anthony D
Project Start
1996-08-01
Project End
2004-07-31
Budget Start
2002-08-01
Budget End
2003-07-31
Support Year
7
Fiscal Year
2002
Total Cost
$244,089
Indirect Cost
Name
University of Minnesota Twin Cities
Department
Genetics
Type
Schools of Medicine
DUNS #
168559177
City
Minneapolis
State
MN
Country
United States
Zip Code
55455
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Herzog, Veronika A; Lempradl, Adelheid; Trupke, Johanna et al. (2014) A strand-specific switch in noncoding transcription switches the function of a Polycomb/Trithorax response element. Nat Genet 46:973-981
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Rai, Aswathy N; Vargas, Marcus L; Wang, Liangjun et al. (2013) Elements of the polycomb repressor SU(Z)12 needed for histone H3-K27 methylation, the interface with E(Z), and in vivo function. Mol Cell Biol 33:4844-56
O'Meara, M Maggie; Simon, Jeffrey A (2012) Inner workings and regulatory inputs that control Polycomb repressive complex 2. Chromosoma 121:221-34
Smith, Matthew; Mallin, Daniel R; Simon, Jeffrey A et al. (2011) Small ubiquitin-like modifier (SUMO) conjugation impedes transcriptional silencing by the polycomb group repressor Sex Comb on Midleg. J Biol Chem 286:11391-400
Wang, Liangjun; Jahren, Neal; Miller, Ellen L et al. (2010) Comparative analysis of chromatin binding by Sex Comb on Midleg (SCM) and other polycomb group repressors at a Drosophila Hox gene. Mol Cell Biol 30:2584-93
Chen, Shuai; Bohrer, Laura R; Rai, Aswathy N et al. (2010) Cyclin-dependent kinases regulate epigenetic gene silencing through phosphorylation of EZH2. Nat Cell Biol 12:1108-14
Zhu, Changqi C; Bornemann, Douglas J; Zhitomirsky, David et al. (2008) Drosophila histone deacetylase-3 controls imaginal disc size through suppression of apoptosis. PLoS Genet 4:e1000009
Wang, Liangjun; Jahren, Neal; Vargas, Marcus L et al. (2006) Alternative ESC and ESC-like subunits of a polycomb group histone methyltransferase complex are differentially deployed during Drosophila development. Mol Cell Biol 26:2637-47

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