Until recently, the actin cytoskeleton and the endocytic machinery were thought to operate independently. However, there is growing evidence in diverse eukaryotes that F-actin and the Arp2/3 complex play a direct role in endocytic internalization. Real-time image analysis of GFP-tagged proteins defined a molecular pathway for receptor-mediated endocytosis in budding yeast, creating unprecedented opportunities to develop a comprehensive understanding of this complex process using tools uniquely available in yeast. Features of the pathway are conserved widely, indicating that principles derived from yeast studies will apply to humans where endocytic defects can contribute to cancer and heart disease. The proposed studies will increase understanding of the role of actin in endocytosis, and how the order and timing of events in the endocytic pathway are achieved. Genomics-scale surveys will fuel focused, hypothesis-driven inquiries. Real-time image analysis using conventional wide-field and TIR fluorescence microscopy will be used to study the dynamics and order of appearance at endocytic sites of at least 60 GFP-tagged endocytic proteins, resulting in a comprehensive description of when each protein arrives at an endocytic site, and what specific motile behaviors of the endocytic complex are associated with the appearance of each protein. Chemical genetics, mass spectrometry and a fluorescence-imaging screen will identify additional endocytic proteins and phosphoregulation mechanisms. The dynamics of GFP-tagged early and late endocytic markers Sla1p and Abp1p, respectively, will be analyzed in mutants of at least 60 endocytic proteins to reveal specific functions. Focused studies, combining molecular genetics and live cell imaging, will provide new insights into the specific in vivo roles of several Arp2/3 activators and the linker protein Sla2p. Finally, real-time fluorescence light microscopy and electron microscopy analyses of novel derivatives of an endocytic cargo molecule will fully reveal the dynamics and ultrastructure of the receptor-mediated endocytosis pathway. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM050399-12
Application #
7336812
Study Section
Cell Development and Function Integrated Review Group (CDF)
Program Officer
Deatherage, James F
Project Start
1997-01-01
Project End
2008-12-31
Budget Start
2008-01-01
Budget End
2008-12-31
Support Year
12
Fiscal Year
2008
Total Cost
$368,969
Indirect Cost
Name
University of California Berkeley
Department
Biochemistry
Type
Schools of Arts and Sciences
DUNS #
124726725
City
Berkeley
State
CA
Country
United States
Zip Code
94704
Lu, Rebecca; Drubin, David G; Sun, Yidi (2016) Clathrin-mediated endocytosis in budding yeast at a glance. J Cell Sci 129:1531-6
Sun, Yidi; Leong, Nicole T; Wong, Tiffany et al. (2015) A Pan1/End3/Sla1 complex links Arp2/3-mediated actin assembly to sites of clathrin-mediated endocytosis. Mol Biol Cell 26:3841-56
Murphy, Mark W; Lee, John K; Rojo, Sandra et al. (2015) An ancient protein-DNA interaction underlying metazoan sex determination. Nat Struct Mol Biol 22:442-51
Lewellyn, Eric B; Pedersen, Ross T A; Hong, Jessica et al. (2015) An Engineered Minimal WASP-Myosin Fusion Protein Reveals Essential Functions for Endocytosis. Dev Cell 35:281-94
Cortesio, Christa L; Lewellyn, Eric B; Drubin, David G (2015) Control of lipid organization and actin assembly during clathrin-mediated endocytosis by the cytoplasmic tail of the rhomboid protein Rbd2. Mol Biol Cell 26:1509-22
Peng, Yutian; Grassart, Alexandre; Lu, Rebecca et al. (2015) Casein kinase 1 promotes initiation of clathrin-mediated endocytosis. Dev Cell 32:231-40
Weinberg, Jasper S; Drubin, David G (2014) Regulation of clathrin-mediated endocytosis by dynamic ubiquitination and deubiquitination. Curr Biol 24:951-9
Buser, Christopher; Drubin, David G (2013) Ultrastructural imaging of endocytic sites in Saccharomyces cerevisiae by transmission electron microscopy and immunolabeling. Microsc Microanal 19:381-92
Zhao, Hongxia; Michelot, Alphee; Koskela, Essi V et al. (2013) Membrane-sculpting BAR domains generate stable lipid microdomains. Cell Rep 4:1213-23
Sun, Yidi; Drubin, David G (2012) The functions of anionic phospholipids during clathrin-mediated endocytosis site initiation and vesicle formation. J Cell Sci 125:6157-65

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