Motile cilia and flagella play key roles in development, fertility, and organismal homeostasis; in humans, defects result in a broad array of phenotypes such as male/female infertility, hydrocephalus, severe bronchial problems and heart malformations. Cilia contain more than 700 distinct protein components and indeed, more than 5% of all human genes are involved in the assembly or function of these motile/sensory organelles. Ciliary motility is powered by the highly complex inner and outer dynein arm motors whose activity results in inter-doublet microtubule (MT) sliding and ciliary beating. However, the molecular mechanisms by which dyneins and other ciliary subsystems are pre-assembled in cytoplasm, docked at specific axonemal locations, and how their activity is controlled by the mechanical state or curvature of the axoneme to generate and propagate specific waveforms remain very unclear. In this proposal we will address key aspects of these fundamental problems in ciliary biology using two model organisms with very complementary attributes: Chlamydomonas will be used for genetic/biochemical and structural approaches, whereas RNAi methods in planaria will be employed to assess the function of novel factors in the context of a ciliated epithelium where thousands of motile cilia are synchronized through hydrodynamic coupling. We recently found that a WD-repeat protein (WDR92), which interacts with a prefoldin-like co-chaperone complex, is necessary to build fully functional motile cilia; lack of WDR92 results in axoneme assembly defects including missing dynein arms, incomplete outer doublet MTs and failure of the central pair complex to form.
In Aim 1 we will use biochemical methods in Chlamydomonas to identify WDR92-interacting components in cytoplasm and then test their role in ciliary formation and function in planaria, as this will provide new paradigms for understanding how cytoplasmic factors influence the coordinate assembly of axonemal substructures. Once trafficked into the ciliary compartment, assembling outer arm dyneins at precise locations is a multi-factorial process that requires both specific docking proteins within the axonemal superstructure and soluble components in the ciliary matrix.
In Aim 2, we will use biochemical/structural methods to define the mechanistic roles of two essential components in the precisely patterned assembly of the outer dynein arm that is absolutely critical for building a fully functional organelle. Axonemal dyneins must sense and respond to the curvature that they experience in order for regions of active sliding to oscillate across the structure and to propagate a wave of motor activity along the organelle generating a ciliary beat. We have predicted that the leucine-rich repeat protein LC1 which binds MTs and also associates with the MT-binding domain of one dynein heavy chain is key to this mechano-switching.
In Aim 3, we will use a newly available LC1 null mutant to rigorously test these mechanistic hypotheses by expressing mutant versions of LC1 designed based on our biochemical/NMR structural studies. This will provide direct mechanistic insight into a conserved dynein regulatory system that is fundamental to the generation and propagation of ciliary beats.

Public Health Relevance

Dyneins are molecular motors required to assemble and power the motility of cilia and flagella, and play key roles in human development and health. Defects in these organelles result in many phenotypes such as infertility, severe bronchial problems and heart malformations. This application will investigate how dyneins are preassembled in the cytoplasm, incorporated into the cilium and how their motor activity is regulated.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM051293-23
Application #
9477673
Study Section
Nuclear and Cytoplasmic Structure/Function and Dynamics Study Section (NCSD)
Program Officer
Gindhart, Joseph G
Project Start
1995-05-01
Project End
2021-04-30
Budget Start
2018-05-01
Budget End
2019-04-30
Support Year
23
Fiscal Year
2018
Total Cost
Indirect Cost
Name
University of Connecticut
Department
Microbiology/Immun/Virology
Type
Schools of Medicine
DUNS #
022254226
City
Farmington
State
CT
Country
United States
Zip Code
Kumar, Dhivya; Thomason, Rebecca T; Yankova, Maya et al. (2018) Microvillar and ciliary defects in zebrafish lacking an actin-binding bioactive peptide amidating enzyme. Sci Rep 8:4547
King, Stephen M; Sale, Winfield S (2018) Fifty years of microtubule sliding in cilia. Mol Biol Cell 29:698-701
Shoemark, Amelia; Moya, Eduardo; Hirst, Robert A et al. (2018) High prevalence of CCDC103 p.His154Pro mutation causing primary ciliary dyskinesia disrupts protein oligomerisation and is associated with normal diagnostic investigations. Thorax 73:157-166
King, Stephen M (2018) Turning dyneins off bends cilia. Cytoskeleton (Hoboken) 75:372-381
Pigino, Gaia; King, Stephen M (2017) Switching dynein motors on and off. Nat Struct Mol Biol 24:557-559
Kumar, Dhivya; Strenkert, Daniela; Patel-King, Ramila S et al. (2017) A bioactive peptide amidating enzyme is required for ciliogenesis. Elife 6:
Kumar, Dhivya; King, Stephen M (2017) Trainspotting in a cilium. Elife 6:
Yamamoto, Ryosuke; Obbineni, Jagan M; Alford, Lea M et al. (2017) Chlamydomonas DYX1C1/PF23 is essential for axonemal assembly and proper morphology of inner dynein arms. PLoS Genet 13:e1006996
Zhu, Xiaoyan; Poghosyan, Emiliya; Gopal, Radhika et al. (2017) General and specific promotion of flagellar assembly by a flagellar nucleoside diphosphate kinase. Mol Biol Cell 28:3029-3042
King, Stephen M; Patel-King, Ramila S (2016) Planaria as a Model System for the Analysis of Ciliary Assembly and Motility. Methods Mol Biol 1454:245-54

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