The long-term objective of the proposed research is to understand the cellular mechanisms for the repair of DNA double strand breaks (DSBs) in eukaryotes. The repair of DSBs by homologous recombination is essential to maintain genome integrity and for the accurate segregation of chromosomes during meiosis. Defects in DNA repair pathways are associated with several cancer-prone syndromes in humans. Recent studies implicate the human breast cancer genes, BRCAI and BRCA2, in the homologous recombination pathway through their association with Rad51 and phenotypic characterization of cell lines with hypomorphic alleles. Therefore, understanding the mechanisms of DSB repair will be important for understanding these human pathologies. In eukaryotes, components of the recombinational repair pathway are highly conserved, and the Rad51 protein plays a key role in DSB repair by catalyzing synapsis and strand exchange between homologous duplexes. However, Rad51 requires a number of other proteins, including replication factor A (RPA), Rad52, RadS4, Rad55 and Rad57, to accomplish strand exchange. The major goal of this proposal is to further characterize the role of Rad51 and two of the accessory proteins, Rad55 and Rad57, in this process. We have isolated a novel class of rad51 alleles that partially suppress the DNA repair defects of rad55 and rad57 strains. These will be subject to genetic and biochemical analyses to understand the mechanism for suppression. To directly determine the role of Rad55 and Rad57 in stimulation of Rad5 1-catalyzed strand exchange, both proteins will be purified and characterized in vitro for DNA binding, ATPase and strand exchange activity in the presence or absence of Rad5 1 and RPA. Gene replacement using double-stranded linear fragments occurs with high efficiency in rad51 mutants. We propose to investigate the genetic control of gene targeting, role of transcription of the target locus, and mechanisms using a variety of targeting vectors. The use of gene replacement for targeted gene disruption has application for gene therapy, thus an understanding of the mechanism is of fundamental importance.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
3R01GM054099-08S1
Application #
7020168
Study Section
Radiation Study Section (RAD)
Program Officer
Anderson, Richard A
Project Start
1997-01-01
Project End
2005-11-30
Budget Start
2004-04-01
Budget End
2005-11-30
Support Year
8
Fiscal Year
2005
Total Cost
$84,441
Indirect Cost
Name
Columbia University (N.Y.)
Department
Microbiology/Immun/Virology
Type
Schools of Medicine
DUNS #
621889815
City
New York
State
NY
Country
United States
Zip Code
10032
Mott, Christina; Symington, Lorraine S (2011) RAD51-independent inverted-repeat recombination by a strand-annealing mechanism. DNA Repair (Amst) 10:408-15
Ho, Chu Kwen; Mazon, Gerard; Lam, Alicia F et al. (2010) Mus81 and Yen1 promote reciprocal exchange during mitotic recombination to maintain genome integrity in budding yeast. Mol Cell 40:988-1000
Smith, Catherine E; Lam, Alicia F; Symington, Lorraine S (2009) Aberrant double-strand break repair resulting in half crossovers in mutants defective for Rad51 or the DNA polymerase delta complex. Mol Cell Biol 29:1432-41
Mimitou, Eleni P; Symington, Lorraine S (2009) Nucleases and helicases take center stage in homologous recombination. Trends Biochem Sci 34:264-72
Fung, Cindy W; Mozlin, Amy M; Symington, Lorraine S (2009) Suppression of the double-strand-break-repair defect of the Saccharomyces cerevisiae rad57 mutant. Genetics 181:1195-206
Mimitou, Eleni P; Symington, Lorraine S (2009) DNA end resection: many nucleases make light work. DNA Repair (Amst) 8:983-95
Malik, Punjab S; Symington, Lorraine S (2008) Rad51 gain-of-function mutants that exhibit high affinity DNA binding cause DNA damage sensitivity in the absence of Srs2. Nucleic Acids Res 36:6504-10
Mozlin, Amy M; Fung, Cindy W; Symington, Lorraine S (2008) Role of the Saccharomyces cerevisiae Rad51 paralogs in sister chromatid recombination. Genetics 178:113-26
Fung, Cindy W; Fortin, Gary S; Peterson, Shaun E et al. (2006) The rad51-K191R ATPase-defective mutant is impaired for presynaptic filament formation. Mol Cell Biol 26:9544-54
Langston, Lance D; Symington, Lorraine S (2005) Opposing roles for DNA structure-specific proteins Rad1, Msh2, Msh3, and Sgs1 in yeast gene targeting. EMBO J 24:2214-23

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