The long-term objective of this project is to elucidate the molecular structure of the mitochondrial citrate transport protein (CTP) at high resolution and to define the functions of specific amino acid residues in the translocation process. This transporter catalyzes the exchange of tricarboxylates, dicarboxylates, and phosphoenolpyruvate across the inner mitochondrial membrane, and as such is essential to the energy metabolism of eukaryotic cells. Recently, we have developed a procedure enabling the expression and purification of abundant quantities (i.e., 25 mg of purified CTP/liter E. coli culture) of functionally competent yeast mitochondrial CTP. From this foundation, we propose to initiate studies which will fundamentally advance our understanding of how this metabolically important transport protein functions at the molecular, chemical, and ultimately the atomic levels. Specifically, experiments will be carried out to: i) identify residues that are mechanistically essential and/or otherwise important for function via cysteine-scanning mutagenesis of conserved residues, followed by overexpression, purification, and functional characterization of the mutated CTPs; ii) identify amino acids that comprise the substrate translocation pathway through the CTP via probing the accessibility of cysteines (engineered into specific locations within transmembrane domains of a Cys-less CTP construct) to covalent modifying reagents; and iii) identify conditions enabling the growth of X-ray quality crystals of the CTP. In combination, these studies will provide information essential to an understanding of the chemical and structural bases for mitochondrial CTP function, and will set the stage for obtaining the first high-resolution structure of a metabolite transport protein. The health relatedness of this project concerns the central role of the CTP in the bioenergetics of eukaryotic cells. Furthermore, altered CTP function in certain disease states (e.g., diabetes, cancer) is an important aspect of the aberrant intermediary metabolism that characterizes these pathologies. Thus, an elucidation of the chemical and structural bases for substrate translocation through the CTP is essential to an understanding of the role of the CTP in energy production in both normal physiological and pathological states.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM054642-05
Application #
6019179
Study Section
Physical Biochemistry Study Section (PB)
Project Start
1996-07-01
Project End
2000-07-31
Budget Start
1999-07-01
Budget End
2000-07-31
Support Year
5
Fiscal Year
1999
Total Cost
Indirect Cost
Name
Rosalind Franklin University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
069501252
City
North Chicago
State
IL
Country
United States
Zip Code
60064
Mayor, June A; Sun, Jiakang; Kotaria, Rusudan et al. (2010) Probing the effect of transport inhibitors on the conformation of the mitochondrial citrate transport protein via a site-directed spin labeling approach. J Bioenerg Biomembr 42:99-109
Sun, Jiakang; Aluvila, Sreevidya; Kotaria, Rusudan et al. (2010) Mitochondrial and Plasma Membrane Citrate Transporters: Discovery of Selective Inhibitors and Application to Structure/Function Analysis. Mol Cell Pharmacol 2:101-110
Aluvila, Sreevidya; Sun, Jiakang; Harrison, David H T et al. (2010) Inhibitors of the mitochondrial citrate transport protein: validation of the role of substrate binding residues and discovery of the first purely competitive inhibitor. Mol Pharmacol 77:26-34
Aluvila, Sreevidya; Kotaria, Rusudan; Sun, Jiakang et al. (2010) The yeast mitochondrial citrate transport protein: molecular determinants of its substrate specificity. J Biol Chem 285:27314-26
Remani, Sreevidya; Sun, Jiakang; Kotaria, Rusudan et al. (2008) The yeast mitochondrial citrate transport protein: identification of the Lysine residues responsible for inhibition mediated by Pyridoxal 5'-phosphate. J Bioenerg Biomembr 40:577-85
Ma, Chunlong; Remani, Sreevidya; Sun, Jiakang et al. (2007) Identification of the substrate binding sites within the yeast mitochondrial citrate transport protein. J Biol Chem 282:17210-20
Ma, Chunlong; Remani, Sreevidya; Kotaria, Rusudan et al. (2006) The mitochondrial citrate transport protein: evidence for a steric interaction between glutamine 182 and leucine 120 and its relationship to the substrate translocation pathway and identification of other mechanistically essential residues. Biochim Biophys Acta 1757:1271-6
Ma, Chunlong; Kotaria, Rusudan; Mayor, June A et al. (2005) The yeast mitochondrial citrate transport protein: characterization of transmembrane domain III residue involvement in substrate translocation. J Biol Chem 280:2331-40
Cascio, Michael; Mayor, June A; Kaplan, Ronald S (2004) Analysis of the secondary structure of the cys-less yeast mitochondrial citrate transport protein and four single-cys variants by circular dichroism. J Bioenerg Biomembr 36:429-38
Ma, Chunlong; Kotaria, Rusudan; Mayor, June A et al. (2004) The mitochondrial citrate transport protein: probing the secondary structure of transmembrane domain III, identification of residues that likely comprise a portion of the citrate transport pathway, and development of a model for the putative TMDIII-TMDIII J Biol Chem 279:1533-40

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