The primary aim of this proposal is to solve by cryoelectron microscopy the structure of phospholamban (PLB), a small transmembrane protein that is central to beta-adrenergic regulation of cardiac contractility. Co-crystals containing PLB together with the calcium pump from sarcoplasmic reticulum (SR Ca-ATPase), have already been made by co-reconstitution of purified Ca-ATPase with recombinant PLB. Initially, Dr. Stokes will aim for 15 A resolution which will reveal the oligomeric state (which is thought to be pentameric) of PLB and its site of binding to Ca -ATPase. Co-crystals will also be made from single site mutants of PLB that produce monomers and tetramers and their structure will help define the role of oligomerization in this regulation. Finally, PLB will be crystallized in the absence of Ca-ATPase by reconstitution and by using monoclonal antibodies to mediate crystal contacts. Such crystals will allow Dr. Stokes to compare PLB structure before and after phosphorylation, which is the physiological switch controlling its regulation of Ca-ATPase. Ultimately, Dr. Stokes hope to improve the resolution to better than 10 A, thus revealing the arrangement of alpha-helices in both PLB and Ca-ATPase and better defining their structural interactions. Another aim of this proposal is to use methods previously developed for PLB and Ca-ATPase for reconstitution and crystallization of three related ion pumps, Na/K-ATPase, H/K-ATPase and plasma membrane Ca-ATPase, with the ultimate goal of investigating their structures by cryoelectron microscopy. Purified protein will be obtained from 3 different collaborators and initial reconstitution will be done at high lipid-to-protein ratios to assess the activity of the proteins. Thereafter, this ratio will be lowered and 2D membrane crystals will be induced in the reconstituted membranes; previous work has defined crystallization conditions which will be used as a starting point. H/K-ATPase is the target of clinical therapies for ulcers and structural information wil help us understand the mechanism of the various drugs. The family of ion pumps include those responsible for Menkes and Wilsons disease, and extrapolation of the structures will improve understanding of the molecular mechanisms for these diseases.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM056960-04
Application #
6181242
Study Section
Biophysical Chemistry Study Section (BBCB)
Program Officer
Lewis, Catherine D
Project Start
1997-09-30
Project End
2002-08-31
Budget Start
2000-09-01
Budget End
2002-08-31
Support Year
4
Fiscal Year
2000
Total Cost
$252,113
Indirect Cost
Name
New York University
Department
Anatomy/Cell Biology
Type
Schools of Medicine
DUNS #
City
New York
State
NY
Country
United States
Zip Code
10016
Glaves, John Paul; Trieber, Catharine A; Ceholski, Delaine K et al. (2011) Phosphorylation and mutation of phospholamban alter physical interactions with the sarcoplasmic reticulum calcium pump. J Mol Biol 405:707-23
Allen, Gregory S; Wu, Chen-Chou; Cardozo, Tim et al. (2011) The architecture of CopA from Archeaoglobus fulgidus studied by cryo-electron microscopy and computational docking. Structure 19:1219-32
Wu, Chen-Chou; Rice, William J; Stokes, David L (2008) Structure of a copper pump suggests a regulatory role for its metal-binding domain. Structure 16:976-85
Hu, Guo-Bin; Rice, William J; Drose, Stefan et al. (2008) Three-dimensional structure of the KdpFABC complex of Escherichia coli by electron tomography of two-dimensional crystals. J Struct Biol 161:411-8
Vink, Martin; Derr, Kd; Love, James et al. (2007) A high-throughput strategy to screen 2D crystallization trials of membrane proteins. J Struct Biol 160:295-304
Pomfret, Andrew J; Rice, William J; Stokes, David L (2007) Application of the iterative helical real-space reconstruction method to large membranous tubular crystals of P-type ATPases. J Struct Biol 157:106-16
Chen, Zhenhui; Akin, Brandy L; Stokes, David L et al. (2006) Cross-linking of C-terminal residues of phospholamban to the Ca2+ pump of cardiac sarcoplasmic reticulum to probe spatial and functional interactions within the transmembrane domain. J Biol Chem 281:14163-72
Stokes, David L; Pomfret, Andrew J; Rice, William J et al. (2006) Interactions between Ca2+-ATPase and the pentameric form of phospholamban in two-dimensional co-crystals. Biophys J 90:4213-23
Chen, Zhenhui; Stokes, David L; Jones, Larry R (2005) Role of leucine 31 of phospholamban in structural and functional interactions with the Ca2+ pump of cardiac sarcoplasmic reticulum. J Biol Chem 280:10530-9
Hinsen, Konrad; Reuter, Nathalie; Navaza, Jorge et al. (2005) Normal mode-based fitting of atomic structure into electron density maps: application to sarcoplasmic reticulum Ca-ATPase. Biophys J 88:818-27

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