Contemporary carbohydrate is being continually challenged by the ever expanding field of glycobiology and, more specifically, by the complexity and diversity of biologically and medically important oligosaccharides uncovered whose synthesis is mandated by their extremely tedious isolation and purification from natural sources in minute quantities. In spite of the remarkable recent advances in the synthesis of carbohydrates, many of which could not have been contemplated more than a few years ago, there still remains many important problems in carbohydrate chemistry to be addressed before the full potential of the field of glycobiology can even begin to be realized.
The aims of this project are to provide efficient, effective syntheses of beta-L- and beta-D-rhamnosides and further improved methods for the beta-D-mannosides in both the solution and solid phases. These targets are being pursued with a view to the synthesis of the antigenic capsular polysaccharides from the various strains of Streptococcus pneumoniae, all of which have the beta-L-rhamnoside linkage the core of the repeating unit. These capsular polysaccharides are components of multi- valent vaccines used for the prevention of pneumococcal infections, which remain a significant cause of morbidity worldwide especially given the increasing numbers of antibiotic resistant pneumococci. A further aim is to synthesize the common exopolysaccharide repeating units from Escherichia hermannii ATCC 33650 and 33650, which has a beta-D-rhamnopyranoside at its core. This is a very different problem, requiring a different solution to that of the Streptococcus pneumoniae capsular polysaccharides, as D-rhamnose, unlike L-rhamnose, is not readily available and so cannot be used as starting material. It is intended to develop all of the methods in both the solution and polymer-supported systems. Both have their role to play in the future of carbohydrate chemistry, with the solution methods probably remaining optimal for large quantities of smaller oligosaccharides, and the polymer supported methods being required for the production of pure, longer oligomers. Accordingly, it is necessary that any truly valuable method be demonstrated to be readily transferable between the two phases.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM057335-07
Application #
6744819
Study Section
Bio-Organic and Natural Products Chemistry Study Section (BNP)
Program Officer
Schwab, John M
Project Start
1998-05-01
Project End
2006-04-30
Budget Start
2004-05-01
Budget End
2005-04-30
Support Year
7
Fiscal Year
2004
Total Cost
$270,986
Indirect Cost
Name
University of Illinois at Chicago
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
098987217
City
Chicago
State
IL
Country
United States
Zip Code
60612
Crich, David; Rahaman, Md Yeajur (2011) Synthesis and structural verification of the xylomannan antifreeze substance from the freeze-tolerant Alaskan beetle Upis ceramboides. J Org Chem 76:8611-20
Crich, David (2011) Methodology development and physical organic chemistry: a powerful combination for the advancement of glycochemistry. J Org Chem 76:9193-209
Sharma, Indrajeet; Crich, David (2011) Direct Fmoc-chemistry-based solid-phase synthesis of peptidyl thioesters. J Org Chem 76:6518-24
Crich, David; Rahaman, Md Yeajur (2010) Dihydro-3-(triphenylphosphoranylidene)-2,5-thiophendione: A Convenient Synthon for the Preparation of Substituted 1,4-Thiazepin-5-ones and Piperidinones via the Intermediacy of Thioacids. Tetrahedron 66:6383-6390
Crich, David; Picard, Sebastien (2009) Highly stereoselective synthesis of alpha-D-mannopyranosyl phosphosugars. J Org Chem 74:9576-9
Crich, David; Li, Linfeng; Shirai, Michio (2009) The 4-(tert-butyldiphenylsiloxy)-3-fluorobenzyl group: a new alcohol protecting group, fully orthogonal with the p-methoxybenzyl group and removable under desilylation conditions. J Org Chem 74:2486-93
Crich, David; Li, Linfeng (2009) Stereocontrolled synthesis of D- and L-beta-rhamnopyranosides with 4-O-6-S-alpha-cyanobenzylidene-protected 6-thiorhamnopyranosyl thioglycosides. J Org Chem 74:773-81
Crich, David; Karatholuvhu, Maheswaran S (2008) Application of the 4-trifluoromethylbenzenepropargyl ether group as an unhindered, electron deficient protecting group for stereoselective glycosylation. J Org Chem 73:5173-6
Crich, David; Li, Ming (2008) Block synthesis of tetra- and hexasaccharides (beta-D-glycero-D-manno-Hep p-(1-->4)-[alpha-l-Rha p-(1-->3)-beta-D-glycero-D-manno-Hep p-(1-->4)]n-alpha-L-Rha p-OMe (n = 1 and 2)) corresponding to multiple repeat units of the glycan from the surface-layer J Org Chem 73:7003-10
Crich, David; Wu, Baolin; Jayalath, Prasanna (2007) Convergent synthesis of a beta-(1-->3)-mannohexaose. J Org Chem 72:6806-15

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