We propose to develop a system, based on matrix-assisted laser desorption (MALDI) mass spectrometry, which is capable of producing images of tissues or other relevant biological samples in discrete m/z values in order to determine the spatial arrangement o specific molecules in these samples. Ion images would be produced by a repetitive exposure of the sample by the laser beam where adjacent spots are irradiated. The result would be an ordered array of mass spectra, keyed to specific locations in the sample, which would be the database for the production of individual or summed ion images. From one raster of the sample, specific ion image, at any chosen m/z value, could be produced to give the spatial arrangement of molecules of interest. Proteins and peptides will be identified using post-source decay techniques and proteolytic digestion with endo- and exo-peptidases followed by post-source decay analysis. The overall goal is to develop and apply a technique that would permit the localization of specific molecules in tissue and other biological samples. The proposal is targeted toward analysis of peptides and proteins in mammalian tissue sections. The specific goals are 1) Instrument development involving modifications to an existing commercial MALDI (TOF) mass spectrometer, including changes to the laser optics, target movement system, and instrument control hardware and software. This would permit us to achieve approximately 1-5 micrometer resolution and at sensitivities in the range of attomoles/(10 micrometers-squared). Image resolution and sensitivity would be variable in order to optimize the analysis for a particular sample. (2) Development of methods for sample preparation and target surface modifications to achieve hig sensitivity and high image resolution, with molecular sensitivity. Tissues wil be measured both directly and indirectly; the latter as blotted images. A number of different active target surfaces would be used for blotting techniques. (3) Applications to specific research areas involving questions about certain spatial distributions of molecules within specific tissues. Thes include: i) processing of peptides and proteins in rat pituitary and pancreas, ii) binding of proteins to antibodies, iii) location of some specific forms of cytochrome P450 in mammalian tissue, iv) location of isoforms of selenoprotein in human kidney tissue, and v) identification and location of neuropeptides in brain tissue from a parkinsonian animal model.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM058008-03
Application #
6181321
Study Section
Metallobiochemistry Study Section (BMT)
Program Officer
Edmonds, Charles G
Project Start
1998-09-01
Project End
2002-08-31
Budget Start
2000-09-01
Budget End
2001-08-31
Support Year
3
Fiscal Year
2000
Total Cost
$318,739
Indirect Cost
Name
Vanderbilt University Medical Center
Department
Biochemistry
Type
Schools of Medicine
DUNS #
004413456
City
Nashville
State
TN
Country
United States
Zip Code
37212
Grove, Kerri J; Lareau, Nichole M; Voziyan, Paul A et al. (2018) Imaging mass spectrometry reveals direct albumin fragmentation within the diabetic kidney. Kidney Int 94:292-302
Chumbley, Chad W; Reyzer, Michelle L; Allen, Jamie L et al. (2016) Absolute Quantitative MALDI Imaging Mass Spectrometry: A Case of Rifampicin in Liver Tissues. Anal Chem 88:2392-8
Van Driest, Sara L; Marshall, Matthew D; Hachey, Brian et al. (2016) Pragmatic pharmacology: population pharmacokinetic analysis of fentanyl using remnant samples from children after cardiac surgery. Br J Clin Pharmacol 81:1165-74
Anderson, David M G; Van de Plas, Raf; Rose, Kristie L et al. (2016) 3-D imaging mass spectrometry of protein distributions in mouse Neurofibromatosis 1 (NF1)-associated optic glioma. J Proteomics 149:77-84
Zubair, Faizan; Laibinis, Paul E; Swisher, William G et al. (2016) Trypsin and MALDI matrix pre-coated targets simplify sample preparation for mapping proteomic distributions within biological tissues by imaging mass spectrometry. J Mass Spectrom 51:1168-1179
Marien, Eyra; Meister, Michael; Muley, Thomas et al. (2016) Phospholipid profiling identifies acyl chain elongation as a ubiquitous trait and potential target for the treatment of lung squamous cell carcinoma. Oncotarget 7:12582-97
Spraggins, Jeffrey M; Rizzo, David G; Moore, Jessica L et al. (2016) Next-generation technologies for spatial proteomics: Integrating ultra-high speed MALDI-TOF and high mass resolution MALDI FTICR imaging mass spectrometry for protein analysis. Proteomics 16:1678-89
Taverna, Domenico; Norris, Jeremy L; Caprioli, Richard M (2015) Histology-directed microwave assisted enzymatic protein digestion for MALDI MS analysis of mammalian tissue. Anal Chem 87:670-6
Van de Plas, Raf; Yang, Junhai; Spraggins, Jeffrey et al. (2015) Image fusion of mass spectrometry and microscopy: a multimodality paradigm for molecular tissue mapping. Nat Methods 12:366-72
Spraggins, Jeffrey M; Rizzo, David G; Moore, Jessica L et al. (2015) MALDI FTICR IMS of Intact Proteins: Using Mass Accuracy to Link Protein Images with Proteomics Data. J Am Soc Mass Spectrom 26:974-85

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