The research described here is directed at understanding a gene-silencing phenomenon known as RNAi. During RNAi, dsRNA directs the post-transcriptional sequence-specific inhibition of gene expression. Recent studies have begun to reveal how dsRNA is converted into a potent gene-silencing agent, and how related mechanisms are important in germline maintenance and developmental gene regulation in a variety of animals and plants. The proposed studies will employ an integrated set of molecular, biochemical and genetic methods using the nematode Caenorhabditis elegans as a model system and will address the following questions; (i) How is RNAi initiated? (ii) How do RNAi and mechanistically related developmental pathways, direct distinct outcomes; mRNA destruction vs. translation inhibition? and (iii) what gene products function in RNAi and related pathways? The findings from these studies will advance our understanding of RNAi and of related pathways in other organisms including humans and may lead to improved genetic interference technologies. Moreover, because the genetic mechanisms of RNAi are related to ancient gene-regulatory mechanisms, the proposed studies will lead to new insights of potential importance to our understanding of human development and disease. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM058800-07
Application #
6861768
Study Section
Cell Development and Function Integrated Review Group (CDF)
Program Officer
Rhoades, Marcus M
Project Start
1999-01-01
Project End
2007-03-31
Budget Start
2005-04-01
Budget End
2006-03-31
Support Year
7
Fiscal Year
2005
Total Cost
$318,000
Indirect Cost
Name
University of Massachusetts Medical School Worcester
Department
Other Basic Sciences
Type
Schools of Medicine
DUNS #
603847393
City
Worcester
State
MA
Country
United States
Zip Code
01655
Tang, Wen; Seth, Meetu; Tu, Shikui et al. (2018) A Sex Chromosome piRNA Promotes Robust Dosage Compensation and Sex Determination in C. elegans. Dev Cell 44:762-770.e3
Seth, Meetu; Shirayama, Masaki; Tang, Wen et al. (2018) The Coding Regions of Germline mRNAs Confer Sensitivity to Argonaute Regulation in C. elegans. Cell Rep 22:2254-2264
Ishidate, Takao; Ozturk, Ahmet R; Durning, Daniel J et al. (2018) ZNFX-1 Functions within Perinuclear Nuage to Balance Epigenetic Signals. Mol Cell 70:639-649.e6
Shen, En-Zhi; Chen, Hao; Ozturk, Ahmet R et al. (2018) Identification of piRNA Binding Sites Reveals the Argonaute Regulatory Landscape of the C. elegans Germline. Cell 172:937-951.e18
Gammon, Don B; Ishidate, Takao; Li, Lichao et al. (2017) The Antiviral RNA Interference Response Provides Resistance to Lethal Arbovirus Infection and Vertical Transmission in Caenorhabditis elegans. Curr Biol 27:795-806
Tang, Wen; Tu, Shikui; Lee, Heng-Chi et al. (2016) The RNase PARN-1 Trims piRNA 3' Ends to Promote Transcriptome Surveillance in C. elegans. Cell 164:974-84
Gammon, Don B; Mello, Craig C (2015) RNA interference-mediated antiviral defense in insects. Curr Opin Insect Sci 8:111-120
Hainer, Sarah J; Gu, Weifeng; Carone, Benjamin R et al. (2015) Suppression of pervasive noncoding transcription in embryonic stem cells by esBAF. Genes Dev 29:362-78
Conte Jr, Darryl; MacNeil, Lesley T; Walhout, Albertha J M et al. (2015) RNA Interference in Caenorhabditis elegans. Curr Protoc Mol Biol 109:26.3.1-30
Tsai, Hsin-Yue; Chen, Chun-Chieh G; Conte Jr, Darryl et al. (2015) A ribonuclease coordinates siRNA amplification and mRNA cleavage during RNAi. Cell 160:407-19

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