This continuing project investigates the C2 and pleckstrin homology (PH) motifs, which are conserved signaling domains used as targeting modules in over 300 and 800 human proteins, respectively. Both of these motifs are activated by a second messenger then dock to a specific intracellular membrane, thereby targeting their parent proteins to the membrane surface where substrates or effectors are located. Such targeting is essential for the activation of a wide array of signaling pathways, including phosphorylation cascades, G protein circuits, calcium signaling, vesicle trafficking, phago-, endo-, and exo-cytosis, synaptic vesicle fusion and neurotransmitter release, generation of lipid-derived second messengers, control of cell growth and chemotaxis. C2 and PH domains are also linked to a wide array of human diseases ranging from cancer (C2 domain of PTEN; PH domain of protein kinase B / Akt) to inflammation (C2 domain of cytosolic phospholipase A2). Moreover, multiple C2 and PH domains are essential components of the leukocyte chemotaxis pathway responsible for tracking down invading or damaged cells marked for destruction, a pathway that is central to effective immune response.
The Specific Aims of the project are to elucidate the molecular mechanisms used by C2 and PH domains to recognize and dock to their specific target membranes, to generate a structural picture of the membrane-docked states of both domains, and to develop a spatiotemporal map of the complex web of targeting events triggered by C2 and PH domains during leukocyte chemotaxis. The Progress Report describes published and preliminary results revealing the mechanisms of C2 domain calcium selectivity and activation, the mechanism of PH domain searching for its rare target lipid, and the docking geometry of membrane-bound C2 domains. Overall, the results of the proposed studies will have significant implications for a molecular understanding of C2 and PH domain signaling in human health and disease.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
2R01GM063235-05
Application #
6929572
Study Section
Special Emphasis Panel (ZRG1-BPC-B (02))
Program Officer
Shapiro, Bert I
Project Start
2001-04-01
Project End
2009-03-31
Budget Start
2005-04-01
Budget End
2006-03-31
Support Year
5
Fiscal Year
2005
Total Cost
$316,773
Indirect Cost
Name
University of Colorado at Boulder
Department
Chemistry
Type
Schools of Arts and Sciences
DUNS #
007431505
City
Boulder
State
CO
Country
United States
Zip Code
80309
Buckles, Thomas C; Ziemba, Brian P; Masson, Glenn R et al. (2017) Single-Molecule Study Reveals How Receptor and Ras Synergistically Activate PI3K? and PIP3 Signaling. Biophys J 113:2396-2405
Ziemba, Brian P; Burke, John E; Masson, Glenn et al. (2016) Regulation of PI3K by PKC and MARCKS: Single-Molecule Analysis of a Reconstituted Signaling Pathway. Biophys J 110:1811-1825
Ziemba, Brian P; Swisher, G Hayden; Masson, Glenn et al. (2016) Regulation of a Coupled MARCKS-PI3K Lipid Kinase Circuit by Calmodulin: Single-Molecule Analysis of a Membrane-Bound Signaling Module. Biochemistry 55:6395-6405
Lin, Yuan; Protter, David S W; Rosen, Michael K et al. (2015) Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins. Mol Cell 60:208-19
Li, Jianing; Ziemba, Brian P; Falke, Joseph J et al. (2014) Interactions of protein kinase C-? C1A and C1B domains with membranes: a combined computational and experimental study. J Am Chem Soc 136:11757-66
Falke, Joseph J; Ziemba, Brian P (2014) Interplay between phosphoinositide lipids and calcium signals at the leading edge of chemotaxing ameboid cells. Chem Phys Lipids 182:73-9
Ziemba, Brian P; Li, Jianing; Landgraf, Kyle E et al. (2014) Single-molecule studies reveal a hidden key step in the activation mechanism of membrane-bound protein kinase C-?. Biochemistry 53:1697-713
Lai, Chun-Liang; Srivastava, Anand; Pilling, Carissa et al. (2013) Molecular mechanism of membrane binding of the GRP1 PH domain. J Mol Biol 425:3073-90
Ziemba, Brian P; Pilling, Carissa; Calleja, Veronique et al. (2013) The PH Domain of Phosphoinositide-Dependent Kinase-1 Exhibits a Novel, Phospho-Regulated Monomer-Dimer Equilibrium with Important Implications for Kinase Domain Activation: Single-Molecule and Ensemble Studies. Biochemistry 52:4820-9
Ziemba, Brian P; Falke, Joseph J (2013) Lateral diffusion of peripheral membrane proteins on supported lipid bilayers is controlled by the additive frictional drags of (1) bound lipids and (2) protein domains penetrating into the bilayer hydrocarbon core. Chem Phys Lipids 172-173:67-77

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