As more strains of human immunodeficiency type 1 (HIV-1), the virus that causes AIDS, become resistant to existing therapies, it is important to identify and characterize new targets for viral inhibition. The HIV-1 glycoprotein Env (gp120/gp41) is an attractive target because it mediates the initial stages of infection-viral attachment and membrane fusion. The interaction of Env with cellular receptors triggers conformational changes that ultimately lead to formation of a crucial trimer-of-hairpins structure in which the N- and C- terminal regions of the gp4 1 ectodomain associate. Peptides derived fiom the C-terminal region (C-peptides) inhibit membrane fusion by binding to the gp41 N-terminal region and preventing formation of the trimer-of- hairpins. Recently, we designed the 5-Helix protein to target the C-peptide region on the gp41 ectodomain and demonstrated potent, broad-spectrum inhibition of HIV-1 membrane fusion. While these studies have established the N- and C-terminal regions of the gp41 ectodomain as targets for HIV-1 entry inhibition, the physical bases underlying the activities of C-peptides and 5-Helix remain unclear. The studies proposed here are designed to explore the physical principles and mechanistic details of gp41 inhibition. The project's specific aims are: 1) To determine a high-resolution structure of 5-Helix protein using X-ray crystallography to validate the design strategy; 2) To characterize the interaction of 5-Helix and C-peptides by scanning mutagenesis and to correlate observed binding parameters with measured inhibitory potencies; 3) To map and characterize the determinants of resistance to 5-Helix and C-peptide inhibition; and 4) To determine the inhibitory stoichiometry of 5-Helix and C-peptides using functionally-complemented Env hetero-oligomers containing escape mutations obtained in Aim 3. These studies will explore whether 5-Helix and C-peptide inhibition is a thermodynamically or a kinetically driven process and how many molecules are needed to inhibit each gp41 trimer. The experiments will test susceptibilities of the two gp41 inhibitory epitopes to escape mutagenesis, and the results will provide insights into the structure and function of gp41 as it folds into a fusion-active conformation. This mechanistic information will be valuable for development of antiviral therapeutics and HIV- 1 vaccines that target the HIV- 1 gp4 1 ectodomain. ? ?

Public Health Relevance

As the key protein on the HIV-1 surface involved in virion attachment and membrane fusion; Envis a crucial player in HIV-1 cellular invasion. As such; both gp120 and gp41 have become primetargets for the development of therapeutics that block the initial stages of HIV-1 infection.Furthermore; these glycoproteins; or epitopes derived from them; are also likely to be majorcomponents of any future HIV-1 vaccine. The longterm objective of the proposed research is to increase our knowledge about the structure; functionand inhibition of the HIV-1 Env. The experiments outlined here involve inhibitor design andcharacterization in order to explore how Env promotes HIV-1 entry through viral membranefusion. Analyzing of the mechanisms of viral escape from these inhibitors will provide insightsinto the energetics and kinetics of Env structural changes that promote membrane fusion. Thefindings will allow us to probe the structure of a poorly understood intermediate conformation ofgp41; a state that has been shown previously to be vulnerable to antiviral agents and neutralizingantibodies. The research will ultimately facilitate therapeutic and vaccine development for thetreatment and prevention of AIDS.

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
5R01GM066682-05
Application #
7115225
Study Section
Special Emphasis Panel (ZRG1-AARR-1 (01))
Program Officer
Wehrle, Janna P
Project Start
2002-09-01
Project End
2009-08-31
Budget Start
2006-09-01
Budget End
2009-08-31
Support Year
5
Fiscal Year
2006
Total Cost
$268,294
Indirect Cost
Name
Thomas Jefferson University
Department
Biochemistry
Type
Schools of Medicine
DUNS #
053284659
City
Philadelphia
State
PA
Country
United States
Zip Code
19107
Danial, Maarten; Stauffer, Angela N; Wurm, Frederik R et al. (2017) Site-Specific Polymer Attachment to HR2 Peptide Fusion Inhibitors against HIV-1 Decreases Binding Association Rates and Dissociation Rates Rather Than Binding Affinity. Bioconjug Chem 28:701-712
Ahn, Koree W; Root, Michael J (2017) Complex interplay of kinetic factors governs the synergistic properties of HIV-1 entry inhibitors. J Biol Chem 292:16498-16510
Khasnis, Mukta D; Halkidis, Konstantine; Bhardwaj, Anshul et al. (2016) Receptor Activation of HIV-1 Env Leads to Asymmetric Exposure of the gp41 Trimer. PLoS Pathog 12:e1006098
Patton, John; Vuyyuru, Raja; Siglin, Amanda et al. (2015) Evaluation of the efficiency of human immune system reconstitution in NSG mice and NSG mice containing a human HLA.A2 transgene using hematopoietic stem cells purified from different sources. J Immunol Methods 422:13-21
Danial, Maarten; Root, Michael J; Klok, Harm-Anton (2012) Polyvalent side chain peptide-synthetic polymer conjugates as HIV-1 entry inhibitors. Biomacromolecules 13:1438-47
Welch, Brett D; Francis, J Nicholas; Redman, Joseph S et al. (2010) Design of a potent D-peptide HIV-1 entry inhibitor with a strong barrier to resistance. J Virol 84:11235-44
Champagne, Kelly; Shishido, Akira; Root, Michael J (2009) Interactions of HIV-1 inhibitory peptide T20 with the gp41 N-HR coiled coil. J Biol Chem 284:3619-27
Kahle, Kristen M; Steger, H Kirby; Root, Michael J (2009) Asymmetric deactivation of HIV-1 gp41 following fusion inhibitor binding. PLoS Pathog 5:e1000674
Sugaya, Makoto; Hartley, Oliver; Root, Michael J et al. (2007) C34, a membrane fusion inhibitor, blocks HIV infection of langerhans cells and viral transmission to T cells. J Invest Dermatol 127:1436-43
Steger, H Kirby; Root, Michael J (2006) Kinetic dependence to HIV-1 entry inhibition. J Biol Chem 281:25813-21

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