Transcriptional regulation and ubiquitin-mediated proteolysis are cellular processes that feature prominently in the control of cell growth and development. Consistent with their pivotal roles in maintaining cellular homeostasis, deregulation of both transcription and ubiquitin-mediated protein destruction have been implicated in the development of human diseases, including cancer. Although transcriptional control and ubiquitin-mediated proteolysis are generally thought of as distinct events, recent exciting discoveries have directly connected these processes in the control of gene expression: ubiquitylation of a transcription factor has been shown to be required for its function, and the proteasome itself has been shown to participate in transcription by RNA polymerase II. The connection of these processes reveals a previously unanticipated aspect of transcriptional control that we are anxious to explore. Experiments described in this proposal will probe how the ubiquitin-proteasome pathway regulates gene expression, with particular emphasis on understanding the role that activator ubiquitylation plays in transcriptional regulation. To achieve this objective, we will employ a combination of genetic and biochemical approaches in both yeast and human cell systems. We will study how ubiquitin-mediated proteolysis of a natural yeast activator impacts its ability to activate transcription. We will study chimeric activators to learn when and how transcription factors are ubiquitylated, and to reveal the fundamental mechanism through which ubiquitylation regulates transcription factor activity. And finally, we will build on our analysis of transcription factor ubiquitylation by addressing the role that the proteasome plays in gene control. Results of these studies will provide valuable insight into how transcription and the ubiquitin-proteasome pathway interact, and will serve as a paradigm for our understanding of this new dimension in transcriptional control. ? ?

Agency
National Institute of Health (NIH)
Institute
National Institute of General Medical Sciences (NIGMS)
Type
Research Project (R01)
Project #
3R01GM067728-02S1
Application #
6943740
Study Section
Cell Development and Function Integrated Review Group (CDF)
Program Officer
Tompkins, Laurie
Project Start
2003-05-01
Project End
2007-04-30
Budget Start
2004-05-01
Budget End
2005-04-30
Support Year
2
Fiscal Year
2004
Total Cost
$7,490
Indirect Cost
Name
Cold Spring Harbor Laboratory
Department
Type
DUNS #
065968786
City
Cold Spring Harbor
State
NY
Country
United States
Zip Code
11724
Howard, Gregory C; Tansey, William P (2016) Interaction of Gcn4 with target gene chromatin is modulated by proteasome function. Mol Biol Cell 27:2735-41
McCann, Tyler S; Guo, Yan; McDonald, W Hayes et al. (2016) Antagonistic roles for the ubiquitin ligase Asr1 and the ubiquitin-specific protease Ubp3 in subtelomeric gene silencing. Proc Natl Acad Sci U S A 113:1309-14
Bonizec, Mélanie; Hérissant, Lucas; Pokrzywa, Wojciech et al. (2014) The ubiquitin-selective chaperone Cdc48/p97 associates with Ubx3 to modulate monoubiquitylation of histone H2B. Nucleic Acids Res 42:10975-86
Galligan, James J; Rose, Kristie L; Beavers, William N et al. (2014) Stable histone adduction by 4-oxo-2-nonenal: a potential link between oxidative stress and epigenetics. J Am Chem Soc 136:11864-6
McCann, Tyler S; Tansey, William P (2014) Functions of the proteasome on chromatin. Biomolecules 4:1026-44
Geng, Fuqiang; Wenzel, Sabine; Tansey, William P (2012) Ubiquitin and proteasomes in transcription. Annu Rev Biochem 81:177-201
Geng, Fuqiang; Tansey, William P (2012) Similar temporal and spatial recruitment of native 19S and 20S proteasome subunits to transcriptionally active chromatin. Proc Natl Acad Sci U S A 109:6060-5
Howard, Gregory C; Collins, Galen A; Tansey, William P (2011) Letter to the Editor. Yeast :
Zheng, Siyuan; Tansey, William P; Hiebert, Scott W et al. (2011) Integrative network analysis identifies key genes and pathways in the progression of hepatitis C virus induced hepatocellular carcinoma. BMC Med Genomics 4:62
Leung, Amy; Cajigas, Ivelisse; Jia, Peilin et al. (2011) Histone H2B ubiquitylation and H3 lysine 4 methylation prevent ectopic silencing of euchromatic loci important for the cellular response to heat. Mol Biol Cell 22:2741-53

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