The long-term goal of the proposed research is to better understand the molecular basis of circadian rhythms in eukaryotes. These studies will be carried out in Arabidopsis thaliana, a model organism well suited to genetic and biochemical approaches. Although putative clock components have been identified in Arabidopsis, the mechanism by which they regulate circadian rhythms is unclear. In addition, the means by which the central clock controls outputs so that they occur at the most advantageous time of day is unknown. The proposed studies use genetic and biochemical approaches to address these fundamental questions. First, a gene responsible for altered circadian regulation will be positionally cloned and other cloning projects will be initiated. Second, the mechanism by which the clock controls phase-specific gene regulation will be explored and a novel clock-regulated transcriptional activator identified. These studies will greatly improve our understanding of clock regulatory mechanisms, information that ultimately may be used to improve human health through treatment of circadian disorders.
Harmer, Stacey L; Brooks, Christopher J (2018) Growth-mediated plant movements: hidden in plain sight. Curr Opin Plant Biol 41:89-94 |
Shalit-Kaneh, Akiva; Kumimoto, Roderick W; Filkov, Vladimir et al. (2018) Multiple feedback loops of the Arabidopsis circadian clock provide rhythmic robustness across environmental conditions. Proc Natl Acad Sci U S A 115:7147-7152 |
Hughes, Michael E; Abruzzi, Katherine C; Allada, Ravi et al. (2017) Guidelines for Genome-Scale Analysis of Biological Rhythms. J Biol Rhythms 32:380-393 |
Gray, Jennifer A; Shalit-Kaneh, Akiva; Chu, Dalena Nhu et al. (2017) The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size. Plant Physiol 173:2308-2322 |
Müller-Moulé, Patricia; Nozue, Kazunari; Pytlak, Melissa L et al. (2016) YUCCA auxin biosynthetic genes are required for Arabidopsis shade avoidance. PeerJ 4:e2574 |
Brady, Siobhan M; Burow, Meike; Busch, Wolfgang et al. (2015) Reassess the t Test: Interact with All Your Data via ANOVA. Plant Cell 27:2088-94 |
Jones, Matthew Alan; Hu, Wei; Litthauer, Suzanne et al. (2015) A Constitutively Active Allele of Phytochrome B Maintains Circadian Robustness in the Absence of Light. Plant Physiol 169:814-25 |
Hsu, Polly Yingshan; Harmer, Stacey L (2014) Wheels within wheels: the plant circadian system. Trends Plant Sci 19:240-9 |
Anver, Shajahan; Roguev, Assen; Zofall, Martin et al. (2014) Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts. EMBO Rep 15:894-902 |
Hsu, Polly Yingshan; Harmer, Stacey L (2014) Global profiling of the circadian transcriptome using microarrays. Methods Mol Biol 1158:45-56 |
Showing the most recent 10 out of 34 publications